Clostridium saccharobutylicum: CLSA_c00860
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Entry
CLSA_c00860 CDS
T02876
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase NrdD
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
csb
Clostridium saccharobutylicum
Pathway
csb00230
Purine metabolism
csb00240
Pyrimidine metabolism
csb01100
Metabolic pathways
csb01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
CLSA_c00860 (nrdD)
00240 Pyrimidine metabolism
CLSA_c00860 (nrdD)
Enzymes [BR:
csb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
CLSA_c00860 (nrdD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NRDD
ATP-cone
DUF35_N
DZR
zinc_ribbon_2
zf-C3HC4_3
Gly_radical
T4-gp15_tss
TackOD1
HypA
zinc_ribbon_15
DUF2321
HTH_SUN2
Motif
Other DBs
NCBI-ProteinID:
AGX41159
UniProt:
U5MK16
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All DBs
Position
100853..102961
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AA seq
702 aa
AA seq
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MLYVVKRDGREVEFNADKITQAIKGSGNEIGLILKESEVLDTVQTVITYIESEYKKTITV
EQIQNFVEKALREEGYKDIAIAYSSYRKERTKVREIKSDLMRAIRQIGVETDRDNANVGN
NFSSKLLRIASESNKWNTLAIMPKNLAKAHETGDLYYHDLDSYNLTVNCLHIPTREMLEG
GFNTGYGTINAPKRIETAAELSCILLQSTQNDMFGGQSHPDFDNDMGIFVEPTREEIRRE
LEELDIPREKIESILERKVRDKVRQAMQGVVYNLNTMHSRAGSQVPFSSINIGLPTSADA
ALVCEVFLIEYEKGLGKGEQPIFPNIIFRVKSGVNREEDDPYFYLYKLACRVAAKRMNPT
FMNIDADFNKEYYDKGYVPATMGCRTYLMKNINGEPGCKGRGNIAPTTINLPRIGLQAKG
SIDKFFEILDARLNLSKESLMHRYGVLKNLKVKDLPFVAGQGLMKGSEGLGPDDSIEPIL
KQGTWGIGFIGLAETLVALVGKHQGEDDNARELGIKVIEHIRQYCDRLTEETRLNWSCYA
TPAEGLSGKFIKQDKKIFGIIKGVTDKDYYTNSYHVPVGYAISIKDKIDIEAPYHKLCNG
GHISYIEVDDSPDEQTVMDIINYAYRNTNISYMGINFHIRYCRECGTYLHDNEAKCPSCG
STDIQGVSRVTGYLSLDERFGPGKYHEREDRISHTEGHKHHY
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgctatatgttgtaaaaagggacggcagagaggtcgaatttaatgccgataaaataact
caagctattaagggctcagggaatgaaatcggtttgattttaaaagaaagcgaagttcta
gatacggttcaaactgtaattacttatattgaatcagaatataaaaagactataactgta
gaacaaatacaaaattttgttgaaaaagcattaagagaagaagggtataaagatatagca
atagcttattcttcatatagaaaagaaagaacaaaagttagagagataaaatcagattta
atgagagcaattcgccaaattggtgttgaaacagatagagataatgcaaatgtaggtaac
aattttagttcaaagttactaagaatagcttcggaatcaaataagtggaatacattagct
ataatgcctaaaaatttagctaaagctcatgaaacaggagatttatattatcatgatttg
gacagttataatttaactgtaaattgtcttcatattccaactagagaaatgctagaaggt
ggatttaacactggatatggaacaattaatgctcctaagagaatagaaacagctgctgag
ttatcatgtattttattacaatcaactcaaaatgatatgtttggtggtcaatcacatcct
gattttgataatgacatgggtatatttgtagaacctacaagagaagaaatcagaagagaa
ttagaagagttagatattccaagagaaaaaatagaatctatacttgaaagaaaagtaaga
gacaaagttcgacaagcaatgcaaggcgttgtatataatcttaacacaatgcattctaga
gctggttctcaagtaccatttagttcaattaatataggtttacctactagtgcagatgca
gcattggtatgtgaagtatttttaatagaatatgaaaagggattaggaaagggagaacaa
ccaattttcccaaacataattttcagagttaagagtggagttaatagagaagaggatgat
ccgtatttctatttatataaattagcatgtagagttgctgctaagagaatgaatccaaca
tttatgaatatagatgcagattttaataaagaatattatgataaaggatatgttccagca
actatgggttgtagaacttaccttatgaagaatataaatggagagccaggatgtaaaggt
agggggaatatagcgccaactactataaatcttccaagaatagggttacaagcaaaagga
agtatagataaattctttgaaatattagatgcaagattaaatttatcaaaggaatcatta
atgcatagatatggagtattaaagaatctaaaggttaaggatttaccatttgtagctggt
caaggattaatgaagggatcagaaggattaggcccagatgattctattgaaccaatattg
aaacaaggtacatggggaattggatttataggacttgcagaaactttagtagctctagta
ggtaaacatcaaggtgaagatgataatgctagagaattaggaataaaagtaattgagcat
ataagacaatattgtgatagattaacagaagaaactaggttaaattggagttgttatgcc
actccagcagaaggtctttcaggaaagtttataaagcaagataaaaagatatttggaata
attaaaggtgtaacagataaagattattatacaaatagttatcatgttccagtaggatat
gcaatatcaattaaagataaaatagatattgaagcaccatatcacaaactttgcaatggt
ggacatataagctatattgaagtagatgattcaccagatgaacaaacagtaatggatata
attaattatgcatatagaaatactaatataagctatatgggtattaatttccacataaga
tattgtagagaatgtggaacatatttacatgataatgaagctaagtgcccaagttgcgga
agcactgatatacaaggtgtatcaagggttacaggatatttaagcttggatgaaagattt
ggtccaggtaaatatcatgaaagagaagatagaatatctcatactgaaggacataaacat
cattattaa
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