KEGG   Clostridium scindens: HDCHBGLK_00259
Entry
HDCHBGLK_00259    CDS       T06591                                 
Symbol
exoA
Name
(GenBank) Exodeoxyribonuclease
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
csci  Clostridium scindens
Pathway
csci03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:csci00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    HDCHBGLK_00259 (exoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csci03400]
    HDCHBGLK_00259 (exoA)
Enzymes [BR:csci01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     HDCHBGLK_00259 (exoA)
DNA repair and recombination proteins [BR:csci03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     HDCHBGLK_00259 (exoA)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: QBF72914
UniProt: B0NDX1
LinkDB
Position
complement(282797..283549)
AA seq 250 aa
MKFVSWNVNGIRACVQKGFMEFFQEADADIFCIQESKMQEGQLELETPGYHQYWNYAKKK
GYSGTAIFTKQEPISVSYGIGIEEHDQEGRVITLEFEDYYFITVYTPNSQNELARLPYRM
QWEDDFLAYLKKLEEAKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERAKFTSLVDA
GFIDTFRYFYPDAQGIYSWWSYRFSARAKNAGWRIDYFCVSESLEERLVDAKILTDVMGS
DHCPIVLEMK
NT seq 753 nt   +upstreamnt  +downstreamnt
atgaagtttgtttcatggaatgtaaatggaatccgggcctgcgtacagaaaggctttatg
gagttctttcaggaggctgatgcggatattttctgcattcaggaatcgaagatgcaggaa
ggccagctggaactggagactccgggatatcaccagtactggaactacgcgaagaagaaa
gggtattcaggaaccgccatattcacaaagcaggagcccatatccgtatcttacggaatt
ggaatcgaagaacatgaccaggaaggccgcgtgatcaccctggaatttgaagattattat
tttattacagtatatacgcctaactctcagaatgaactggcaaggcttccctatcgtatg
cagtgggaggatgacttccttgcatatctgaagaagttagaagaagcgaagccggtgatc
ttctgcggggacctgaatgtggcccacaaggagattgaccttaagaatcccaagacaaac
cgcaagaatgccggatttacagatgaagagcgggctaagttcacctcgctggtagatgcc
gggttcattgatacgttccggtatttttatccggatgcacaagggatctattcctggtgg
tcttaccgcttcagcgccagggccaagaacgcaggctggcgtatcgactatttctgtgta
tcagaatcactggaggagaggctggtggatgcgaagatcctgacggatgtaatggggtct
gaccactgtccgatcgtattggaaatgaaataa

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