Cynoglossus semilaevis (tongue sole): 103383114
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Entry
103383114 CDS
T04866
Symbol
fbxo18
Name
(RefSeq) F-box DNA helicase 1 isoform X1
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csem04121
]
103383114 (fbxo18)
Enzymes [BR:
csem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
103383114 (fbxo18)
Ubiquitin system [BR:
csem04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
103383114 (fbxo18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
Viral_helicase1
UvrD_C
AAA_19
UvrD_C_2
F-box-like
AAA_30
F-box
PhoH
AAA_22
ResIII
AAA_11
Motif
Other DBs
NCBI-GeneID:
103383114
NCBI-ProteinID:
XP_008314360
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All DBs
Position
8:complement(29721041..29729962)
Genome browser
AA seq
1006 aa
AA seq
DB search
MVLGLLLPMVTTVTTLCPGVCDVQGKAKRRHLSADECQHLGHGSLTEPHVFNQRPGNSDR
HRRHLPRTAPKKHKCEPQLLHHVQEEEEEEEEEDSTLFTAAMELGAEEEEEEEEGEGEAE
GTVDYLQGMTSRMFDEDFDCCETKEEEVEEEVEPLPDAHYGLLGPSRTLLQPRACIDDLP
EEVLRQILALLPAQDLYGGVALTCHRWREIMEDTKFVPFRKQYYRYMKRERGTVEELTSI
LKNSDITGPKSSEHSIRNLVVFMAQHTVGERVRPEDVLHWVRRHRLSPQAEFSVRSRLPD
VQEELETPLAVMAVILVLSEGVGDVQALVSLLTRCMSLTAVTEFLSHMATILLAMERNAV
HISTRLHYNIYYVLQLMENGPGHVSSRSSSRSSSRSSSHQLTAEQQLILNHNIQNDHVVK
IKAFAGTGKTTTLVKYAEQRPHLRFLYVAFNKSVANEARRRFPGNVDCRTVHSLAFRDTG
QRYKSKLTTALNLFSISLVLPPGRGGYTKAKVVASTLRTFMASAEDAVNISHVPDVHTTN
SGNRIVIVHSEKQLFVSDAQMIWNRMKDVRRTDREAYRMTHDGYLKLWQLQEPKPRLSDY
HVLLIDEAQDCTPAIMDVLLSQPCGKILVGDPHQQIYTFRGAVNALQLLEHTHVFYLTQS
FRFGAEIAYVGATILKTCKNVEKILVGGTQKGGVCDENADRVAEAVRTGEACCRGNTAIL
SRCNTGVFDRAVKLTDANPRCRIHFIGDVKNFGLDRIMDLWRLTQPNPHPKFIKDPLIRH
FVRMDGNSVRSLKEYIDQTDDLELNAKLTIVEKYASRIPELLIQLRSCSEPDLHRADFIV
GTVHKAKGLEFESVMITDDFVRVPWPRHRMYRSPAFSLDSVPGDEWNLLYVAATRAKTTL
IISESIYNLLTLAGEYFLKSEPVRSVTPPQAPPPCSVSNCPNCITPGSSFVMSAPTLKCS
DSVLQGGPLCERCVWNRVGPIAFLVTDDVMSMANVPERLAHGVFHV
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggttctaggtttactgttacctatggtaaccacggtaacaacactttgtcccggtgtg
tgtgatgtacaaggaaaggctaaaaggagacatctgagcgcagacgagtgtcaacacctg
ggtcacggctccctcacagagccgcacgtcttcaaccagaggccggggaacagtgaccgc
cacaggaggcacctccccaggacggcccccaagaaacacaagtgtgagcctcagttactc
catcacgttcaggaggaggaggaggaggaggaggaggaggattccactctgttcactgct
gcaatggagttaggagctgaagaggaggaggaggaggaggagggggagggggaggcagag
gggacagtggactacctgcagggaatgacatccaggatgtttgatgaagattttgactgt
tgtgaaactaaggaggaggaggtggaggaggaggtggagccccttcctgacgcccactac
gggctcctgggccccagcaggacgctgcttcagccccgggcctgtattgatgaccttcca
gaggaagttctcaggcagatcctggctctacttcctgcccaggatctgtacggaggcgtc
gcgctgacgtgtcatcggtggagggagatcatggaggataccaagtttgttcctttcagg
aaacagtactaccgctacatgaagagagaacgtggaaccgttgaagagttgacctccatc
ctgaagaacagtgacatcacaggtccaaagtcttcagagcacagcatcaggaaccttgtt
gtgttcatggctcagcacacagtgggggagagggtgaggcctgaagacgtcctccactgg
gtgaggagacaccgtctgtccccccaggctgagttctccgtcagatcacgactcccagac
gttcaggaggagctggagactccattggcagtcatggcagtaattctggtcttgagtgag
ggagtgggagacgtccaggccctggtgtctctcctcacccgctgcatgtccctgactgca
gtcacagagttcctcagtcacatggccaccatcctgctggctatggagaggaacgcagtc
cacatcagtaccaggttgcattacaacatctactacgttctgcagctgatggagaatggt
ccaggtcatgtcagttccaggtccagttccaggtccagttccaggtccagttctcaccag
ctcacagctgaacagcagctcatcctcaaccacaacatccagaacgaccatgtggtcaag
atcaaagcatttgcagggacagggaagaccaccactctggtcaagtatgcagaacagcgc
ccccaccttcgctttctctacgtagccttcaataagtccgtggccaatgaggcgcggcgc
cgtttccccggcaacgtggactgcaggacggtccactccttggccttcagggacactggt
cagagatacaaatctaagttgacaactgccctgaacctgttctccatcagcctggttctg
cccccgggccgggggggctacaccaaggccaaggtggtggcctccaccctccgcaccttc
atggcttcagctgaggacgccgtcaacatcagccacgtccccgacgtccacaccacgaac
tcaggcaacaggatagtcatcgtccacagtgagaagcagctgtttgtcagcgacgctcag
atgatctggaacagaatgaaggacgtccgtcggacagacagagaggcgtaccgcatgaca
catgatggttacctgaagctgtggcagctccaggagcccaagccccgcctctccgactac
cacgtcctgttgatcgacgaggctcaggactgtactccagccatcatggacgtgctgctg
tctcagccgtgtgggaagatcctggttggagatcctcatcagcagatctacaccttcaga
ggagcggtcaacgccctgcagctgctggagcacacacacgtcttctacctgacgcagagc
ttcaggttcggtgcagagatcgcgtacgtcggcgccaccatcctcaagacctgtaagaac
gtggagaagattctggtgggaggaacgcagaaaggtggtgtgtgtgatgagaacgcagac
cgagtggctgaagctgtgaggacaggcgaggcctgttgccgtggaaacacagccatcctg
tccaggtgcaacaccggtgtcttcgacagagctgtcaaactgacggacgcaaacccacgc
tgtcgaatccacttcatcggcgatgtgaagaactttgggctggaccggatcatggacctc
tggaggctgacgcagcccaacccacatcctaaattcatcaaggatccgctcatccgccac
tttgtcaggatggacgggaattctgtgagaagtctgaaggaatacatcgaccagacggac
gacctggagctgaacgccaaactgaccatcgtggaaaagtacgcaagtcggattcctgag
ctgctgatccaactgagaagctgctcggaaccagaccttcacagagcagacttcatcgtg
gggacagttcacaaagccaaaggtctggagtttgagtccgtgatgatcacagacgacttc
gtcagggttccgtggcccagacacaggatgtaccgcagccccgccttctctctggacagc
gttcctggcgatgagtggaaccttctgtacgtggcagcgactcgagccaaaacgacgctg
atcatcagcgagagcatttacaacctgctcaccctggctggggagtactttttaaagtcg
gagcccgtcaggagcgtaacgccaccacaggccccgcccccgtgttctgtctctaactgc
cccaactgcatcactccgggctcgtcattcgtcatgtcggcgccgaccttgaaatgttcg
gactccgtgttacagggaggcccgctgtgtgagaggtgtgtgtggaaccgtgtcggacca
atcgccttcctcgtgaccgatgatgtcatgtcaatggctaacgttccagagagactggcc
cacggcgtcttccatgtctga
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