KEGG   Cynoglossus semilaevis (tongue sole): 103384397Help
Entry
103384397         CDS       T04866                                 

Gene name
hdac6
Definition
(RefSeq) histone deacetylase 6
  KO
K11407  histone deacetylase 6 [EC:3.5.1.98]
Organism
csem  Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:csem00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatase and associated proteins [BR:csem01009]
    103384397 (hdac6)
  09182 Protein families: genetic information processing
   03019 Messenger RNA Biogenesis [BR:csem03019]
    103384397 (hdac6)
   04131 Membrane trafficking [BR:csem04131]
    103384397 (hdac6)
   03036 Chromosome and associated proteins [BR:csem03036]
    103384397 (hdac6)
Enzymes [BR:csem01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     103384397 (hdac6)
Protein phosphatases and associated proteins [BR:csem01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     103384397 (hdac6)
Messenger RNA biogenesis [BR:csem03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     103384397 (hdac6)
Membrane trafficking [BR:csem04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    103384397 (hdac6)
Chromosome and associated proteins [BR:csem03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     103384397 (hdac6)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl zf-UBP
Motif
Other DBs
NCBI-GeneID: 103384397
NCBI-ProteinID: XP_016891143
LinkDB All DBs
Position
10
AA seq 994 aa AA seqDB search
MERKREEEELNNSLKSLDLSFRSTVSETGLIFSEVFTRHKNLWDSSHVEGPDRVMSIMHE
LEKQDLISHCVRVEPREASEDELLQVHTKEYVDLMKLTQTMSEAELRSLSDQYDSVYLHP
ETFQVSSLAVGSVLQLVDQVMSCKLRNGFAVIRPPGHHAQSNLANGYSIFNNIAIAARYA
QNTHGVKRVLIMDWDIHHGQGIQYQFEEDPSALYFSIHRYEQMSFWPHLPESDSMFVGSG
RGKGRNINLAWNKTQMNDSDYIAAFQQLLLPVAYEFQPQLVLVSAGFDAAVGDVKGEMCV
TPQCFHILTHMLMSIAEGRLVLALEGGYNLQSTAEGVAACVRSLLGGPCPPLAPPTAPSD
SALQSISQTISAQCPYWSCLQVLATTTGLVYDERMMEHLNMWDKHHPEQPQRIFKIFSKH
QKLGLVDRCKRIPVRLATEEELAMCHSEQHVQLMGSTSLMKSRALHRLSEDYNSIFLNNQ
SFTSAQLAVGGCFAAVDAILSKEVSNAVAIVRPPGHHAEPDSACGFCLFNTAALAARHAQ
KMTHPEKLRILILDWDVHHGNGTQHMFEDDDSVLYISLHRYDNGVFFPSSEDGAPNRVGV
GKGVGFNVNVAWSGGRMGDSDYLSAFHHVVMPIATEFNPGLVLVSAGFDAARGDPLGGYN
VTPEGYAHLTHMLKSLAGGRILLILEGGYNLTSISDSMTMCTSMLLGDPPPSLGTPLPHP
HHCAVATINEVIRHHSPYWKSLRIQIPASVRTSLPALKHRGKRSSKGKDRKSEASSADNT
IDTLDHLTQGLASLDIGQASPNHSSVTSTPVRGSKAEVCLSQEDVKKEPKKAESEQSQSE
KNPQSPVSTFSRQHQLLCLLCCNRHSGEMEGACGWSTSQEQGLYLIDPLPWCPHLDAVQP
LPPSGVDIHLPCQDCGSDIENWICLTCYQVFCGRYVKEHMVTHGCVTEHPLVLSFSDLSV
WCYPCESYIHHQILHEAKNAAHFAKFGVDVPPWT
NT seq 2985 nt NT seq  +upstreamnt  +downstreamnt
atggagaggaaacgggaggaggaggagctgaacaacagcctcaagtcactggacctttct
tttaggtcaactgtcagtgaaacaggcctgattttttctgaagtcttcactcgtcataaa
aacctttgggattccagtcatgtagaaggtccagacagagttatgtccattatgcacgag
ctggagaaacaggatctgatctctcactgtgtcagggtggagcccagagaggcttccgaa
gatgagctgctacaagttcacacaaaggagtatgtggacctaatgaagttgacccagaca
atgtcagaggctgaactcaggagtctgtctgaccaatacgacagtgtgtacctgcatcct
gagacgtttcaggtgagttcgttggccgtgggttcagttctacaactggtggaccaagtg
atgtcctgtaaactaagaaatggatttgctgtcatcagacctccaggacatcacgctcag
tccaatttggcgaatggatactctatcttcaacaacattgccattgctgctcgatatgct
cagaacacacacggagtcaagagagtgttgataatggattgggacattcaccatggtcaa
ggaatccagtaccaatttgaggaagacccaagtgctctttacttcagtatccacagatac
gagcagatgtccttctggcctcacctgccagagtctgatagtatgtttgtgggtagtgga
cgaggtaaaggacgaaacatcaacctagcctggaacaagactcagatgaatgattctgat
tacatcgctgcttttcaacaactgctcctgcctgtggcatacgagtttcagcctcagctc
gttctggtttctgctgggtttgatgctgctgttggagatgtaaagggggagatgtgtgtt
actcctcagtgtttccacattctcactcacatgttgatgagtattgctgaaggtcgactt
gttcttgctctggagggaggttataaccttcaatccacagcagagggcgtggcagcctgt
gtccgatctctccttggagggccctgtccacctctggctccacccactgctccgtctgat
agtgcactgcagtccattagtcagaccatctctgctcagtgtccatactggagctgtctg
caggtgctggctacaacgacaggcctggtttatgacgagcgtatgatggagcacctgaac
atgtgggacaaacatcatccggagcagccacagagaatcttcaagatattctccaaacat
cagaagcttggactggttgatcgctgcaagcgcatcccagttcgccttgcaacagaggag
gagcttgccatgtgtcatagtgagcaacatgtgcagctcatgggctcgacttcactgatg
aagagcagagccctacacagactcagtgaagactacaactccatctttttgaacaaccag
agttttacctctgctcagctcgctgttggaggctgtttcgccgccgtagatgccattttg
tctaaagaagtgagtaatgccgtggccattgtccgtcctccgggtcatcacgcagagccg
gactctgcctgcggattttgcctcttcaacacagcagccttagctgctcgccatgcccaa
aaaatgacccatcctgaaaaactgaggatccttattctggactgggacgtgcatcatgga
aacgggacgcagcacatgtttgaagatgatgacagtgtcttgtacatctcactccatcgg
tatgacaatggggtgtttttcccctcttcagaagatggtgcccccaacagagtaggtgtg
ggcaaaggggtgggatttaacgtgaatgtggcatggagtggaggaagaatgggcgactct
gattatctgtctgcctttcatcacgtggtgatgcccatcgctactgagtttaaccctggc
cttgttttggtgtcagccggctttgacgcagcacgtggtgacccactgggtggatataat
gtcacccctgaaggatatgcccacctgacacacatgctgaagtctctggcaggagggcgt
atcctgctcatcctggagggtggctacaacctgacctccatctctgactccatgactatg
tgcaccagcatgttgctcggagatcctccaccatccctgggaactccgctaccccatcct
catcattgtgccgtggcaacaattaacgaggtcattcgtcaccattcaccctattggaag
tcactcaggatccaaattccagcatcagtgcgaacatcactgcccgccctgaagcatcgt
gggaaacgtagctccaaaggaaaagacaggaagtcagaggcaagcagcgcggacaataca
atagacactctagatcatctgactcagggattggccagtttagacatcggtcaggcctca
cccaatcacagttcagttacatccactccagtgcgggggtcaaaggcagaggtctgcctt
agccaagaggacgtgaaaaaggagccaaagaaggctgagagtgagcagagccaatcagaa
aagaaccctcagagtccggtgagtactttttcacgacaacatcagcttttgtgcctcctc
tgctgcaacaggcattctggtgaaatggagggagcatgtggttggtcaacatctcaggaa
cagggcttgtacttgatagaccctctgccctggtgtccccacctggatgctgtccagccc
ctcccgccttcaggtgtggacatccatttgccatgtcaggactgcggctcagacattgag
aactggatttgtcttacctgttaccaggtcttttgtgggcgttatgtgaaggaacacatg
gtgactcatggctgtgttactgaacatcctctggtgctcagcttttctgacctttctgtg
tggtgttacccgtgcgagtcctacatccaccaccagattttacacgaggctaaaaatgcg
gctcactttgccaaatttggagtagatgtcccgccctggacctaa

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