Cynoglossus semilaevis (tongue sole): 103385966
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Entry
103385966 CDS
T04866
Symbol
smarcc2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103385966 (smarcc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csem03021
]
103385966 (smarcc2)
03036 Chromosome and associated proteins [BR:
csem03036
]
103385966 (smarcc2)
Transcription machinery [BR:
csem03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103385966 (smarcc2)
Chromosome and associated proteins [BR:
csem03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103385966 (smarcc2)
PBAF complex
103385966 (smarcc2)
GBAF(ncBAF) complex
103385966 (smarcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
103385966
NCBI-ProteinID:
XP_008318233
LinkDB
All DBs
Position
11:4056608..4066737
Genome browser
AA seq
1049 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTKLPMKCFLDFKTGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLTRPVIYLSSDIEPKLLGKLKDIIKRHQGSVTEDKASSSHVVVP
IPASLEEEEWVRPVMKRDKQVLLHWGYFPDSYDTWIPASEIEAAVEDAPSQEKPRKVHAK
WILDLDQYNEWMNEEDYEVGEGCPKRKRISAKTLTDEVTTPDERRDKKPGSAKKRKRSPS
PSPTPPPQESKKKNTKKGPTTPYTKSKRGQREEEQEDLSKDLDEASPVPASEEANPAKTN
NTKKDSDSTPVKGGTDLDEQEDESMETTGKEEEEGSPSVKGEPVKGTDLHEDNVTEQTHH
IIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTS
TACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLVP
LQPKASQTPSTQQLMSFPDKVKDKPADLQNFGLRTDMYSKKTVKSKSVASSMREWTEQET
LLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYIEDSPSTLGPLAFQPVPF
SQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVEEAARSS
GRQDPLYGLEGSGIAGTGLEEGERPKESTDDSKNDNQATEEKKEAKDNKEAVTEEEEKQT
ENGKKEEERAREPEGEREADKTESEMGDGEKDKEGKEGTEEGQKEGDSEGERKAKIERDV
GEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIM
DREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQQIQHQQHSQAGGTHSTPASSG
PPQQGVTAAQQAPSTPAPPPAASPAPVASSAPAPEPQTPQSAHTSPPRPQSQAPAPHSSS
STTPVHHEPSATHTTETLHPAAPVPVPPQ
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaagacggcggcccaaatgtaaaatatttcgaagcatctgatacc
gtctctcagtttgataatgtccgcgtttggctgggaaagaattacaaaaagtacatccag
gctgagccccctaccaacaagtccctgtccagcctggtggtccaactgctccagttccag
gaggaggtgtttggccgacatgtcagcaaccccccactcaccaaactgcctatgaaatgt
tttctagacttcaagacagggggcgctctctgccacatactggctgctgcctacaagttc
aaaagcgaccaaggatggcgcaggtttgacttccagaacccttcaagaatggacagaaac
gtagagatgttcatgactattgagaagtcattggtgcagaacaactgcctcaccagaccc
gtcatctacctgagctctgacatcgaaccaaaactgcttggaaaactcaaagacatcatc
aaaagacatcagggctcagtgactgaagacaaggcttccagttctcatgttgtggtgccc
attcctgccagtctggaggaagaggagtgggtgcgtcctgtgatgaagagagataaacaa
gtgctgcttcactggggttattttcctgacagttacgatacctggatcccagctagtgag
atagaagctgctgtggaggatgctcccagccaggaaaagccaaggaaggtccatgccaag
tggattttagacctggatcagtacaatgagtggatgaacgaggaggactacgaggtcggt
gagggctgccctaagaggaagaggatctctgccaagaccctgacagatgaggtgaccact
cctgatgagaggcgagacaagaagccaggcagtgccaagaagagaaagcgttcgccgtcg
ccttcacccactcctccgcctcaggagagcaagaagaaaaacaccaaaaaaggaccaaca
acaccgtacactaaatccaaacgtggtcagagggaggaggaacaagaagacctcagtaaa
gacctggatgaagcctcccctgttccagcatcagaagaggcaaacccagccaagacaaat
aacactaagaaagactcggactcaactccagttaaaggtggaacagacctggatgagcag
gaagatgagtcaatggaaacaacagggaaggaagaggaggaaggctctccgagtgtgaag
ggtgaaccagtgaaaggcacagaccttcatgaggacaacgtcactgaacagactcaccac
atcatcatacccagctacgctgcatggtttgactacaacagtgttcacgccattgagcgc
agagctctgccagagttttttaacgggaagaacaaatccaaaacgcctgagatttattta
gcgtacaggaacttcatgattgacacctacagactgaaccctcaggagtacctcacctcc
accgcctgccgcaggaacttagcaggagatgtttgtgcaatcatgagggtccacgctttc
ctggagcagtggggtttgatcaactaccaggtggactctgagagccggcccacgcccatg
ggtcctccacccacctctcacttccatgtcttggcagacactccgtccagtctggtgccc
ctgcagcccaaggcctcccagactccgtccacccagcagctgatgtccttccctgataaa
gtgaaggacaaacctgcagatctgcagaattttggattaagaactgacatgtacagcaag
aagactgtgaagagcaagagtgtggccagttcaatgagggagtggacggagcaggaaaca
ctgctgttgctggagggcctggagatgtacaaggacgactggaacaaggtgtcggaacac
gttggcagccgcacacaggacgagtgtatccttcacttcctgcgactgcccatcgaggat
ccctacatagaagacagcccctccaccctgggtccactggccttccagcccgtacctttc
agccaggccgggaaccctgtcatgagcacagtggccttcctcgcctccgtggtcgatcca
cgcgtcgcctccgctgcagctaaatctgctctggaggagttttctcgcatgaaagaggaa
gttcctgcagcgctggtcgaggctcatgtacgacgtgtggaggaggcagcgaggtccagc
ggacgacaggaccctctgtacggcctggaggggagtggcatcgcaggcactggcctggag
gaaggagaaagaccgaaagaaagtactgatgacagcaagaatgacaaccaagcaactgaa
gaaaagaaggaggccaaggacaacaaagaagcggtgactgaggaagaggaaaaacagaca
gagaacggaaagaaggaggaggagagagccagagagcctgaaggagagagggaggcagac
aagacggagtcagagatgggtgacggtgagaaggacaaggaggggaaagaggggacagag
gaaggacagaaagaaggagacagtgaaggagaaagaaaagccaagatagagcgtgacgtc
ggagaggggaacctggcgactgctgctgcatctgctcttgctgctgctgccgtcaaagca
aagcaccttgctgcggtggaagagaggaagatcaaatctctggtggctctgctggtggaa
acacaaatgaagaagctggagattaaactgcgacattttgaagaactagaaaccatcatg
gacagagagagggaggctctggagtatcagcggcagcagctgctggccgaccgtcagtcc
ttccacatggagcagctcaaatacgctgagatgagggctcgacagcagcacttccagcag
atccagcaccagcagcacagccaggccggcggaacccactccaccccggcgtcttcaggc
ccgccgcagcagggcgtgacagcagctcagcaagcccccagcacaccagcaccgccgccg
gctgccagccctgcacccgtggcctcatctgccccggctcctgagccccaaacacctcag
agtgctcacacgtctcctcctcgccctcagagccaggctccagctcctcactccagctca
agcactacacctgtacatcacgagcccagcgccacccacaccacagaaacactccaccct
gcagctccagtcccggtccctccacagtga
DBGET
integrated database retrieval system
