KEGG   Cynoglossus semilaevis (tongue sole): 103388279Help
Entry
103388279         CDS       T04866                                 

Gene name
setdb1
Definition
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
  KO
K11421  histone-lysine N-methyltransferase SETDB1 [EC:2.1.1.43]
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem00310  Lysine degradation
Brite
KEGG Orthology (KO) [BR:csem00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    103388279 (setdb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csem03036]
    103388279 (setdb1)
Enzymes [BR:csem01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     103388279 (setdb1)
Chromosome and associated proteins [BR:csem03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     103388279 (setdb1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    103388279 (setdb1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: SET Tudor_4 TUDOR_5 DUF5604 Pre-SET MBD
Motif
Other DBs
NCBI-GeneID: 103388279
NCBI-ProteinID: XP_008321416
LinkDB All DBs
Position
13
AA seq 1222 aa AA seqDB search
MESSDGMDVDGWDSSLEEELGVSLDDLRKCIEEAVEQSEIVKKKKAQLTELKKWVEQKEK
EEALTEGLLKDASQSILECEMLVKATFRRNGLVYGESSSEDEGGGGGMLPSSEVIEIEDD
DEDDDVIAVGCLVPPTKPLTPVKDSMLTEASAAIQKTSHQVQKLAQMVKPTAGVSILRST
GPPGAAGSAPAVFVSQVASGSLTQPKANVEEDEVRIGMNILGKKRTKTWHRGVLVAITPV
ANDTFKYKVKFDKGKSLLSGNHVAFDYNPTLESLYVGARVVAKYKDGNLVWLYAGIVAEM
PNNKNRMRFLIFFDDGYASYVTLPELFPVCRPMKRTWEDIEDASCRDFIEEYITAYPSRP
MVLLKVNQIIKTEWEGTWWKSKVEDVDGSLVKILFLDDKRSEWIYRGSTRLEPMFNLKMT
TANTQEKKLAGQQRTRPNMGALRSKGPVVQYTSDGLVGASPVKTTQITVSPSPPTVQPRP
LLAQPPQIQPSPQPRMDTKHQMAKKSTSPFVPGVGGTHASKVMQSLSSTSSNLPGPAAVT
IHRGRTLNPPTITYQRQQSTPAPVHPVMTRAVSTVPQQAPYRAPTDRIFYMVHTCQPACL
NRVRPSKSDVHRGKNPLLTPLLYDFRRMIGRRKVNRKMFFHVIYKAPCGLCLRNMPEIQN
YLFLTQCDFIFLEMFCLDPYVLVDRRFQPQKPCYYIPDITDGKEDIPLSCVNEIDSTPPP
DVAYSKERIPEDGVFINTSSDFLVGCDCTDGCLDKSKCSCHQLTLQATGCTPGGQINPNA
GYLYKRLEECLPTGIYECNKRCKCCAEMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDV
AKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESEAHCSDSEGSG
VDMSRMKVKPGVSSSQSGAQHTAQSQSSSDSNDADDKDSKSEEESDSSDDTFVKDNFYTP
SSVWRSYTTRGQAKGNKEGSQDSKDGLGGAAKETSEQKPPSMPEETGKSKVASWLTSQGL
KKDSGDSKSQVKSETGKKQDVMTLSDSDDVQTISSGSDDNKEKEKIIPGLTKKQVAVKST
RGIALKTSHGMMVKSGTPGGSGGQGGQGSKTGQQGQTAGGGENISKNTRLFFDGEESCYI
IDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEV
GSVEGKVLLCCCGSTECRGRLL
NT seq 3669 nt NT seq  +upstreamnt  +downstreamnt
atggaaagcagcgacgggatggacgtggacggctgggactccagtctggaggaagaatta
ggtgtttctctggacgacctcaggaagtgcattgaagaggccgtggagcagagtgagatc
gtgaagaagaaaaaggctcagctgacggagctgaagaaatgggtggagcagaaggagaag
gaagaggctttgactgaaggactcctcaaggacgccagccagtccattcttgaatgtgag
atgctggtgaaggccaccttccgtaggaatggtcttgtttacggggagagcagctccgag
gatgagggaggtggaggagggatgctgccctcttctgaggtcatagaaatagaggacgat
gatgaggatgacgatgtcattgccgttggctgtttggttcctcccacgaagcccctgact
cctgtgaaagattcaatgctaacagaagcatctgcagcgatacagaaaaccagtcatcag
gtgcagaagttggctcagatggtcaagccaacagcaggggtctctattctccggtctaca
ggaccaccaggtgctgcgggttcagcgccagcagtgtttgtgtcacaggttgcctctggg
tccttgacccagcccaaggcaaacgtagaagaggacgaggtccgaatcgggatgaacatt
ttgggaaagaaacgcacaaagacgtggcaccgaggcgtcctggtcgctatcacccccgtc
gcgaacgacacattcaaatacaaagtgaagttcgataaaggaaagagtttgctgtcagga
aaccatgtggcctttgattacaaccccaccctggagagtctgtatgttggtgcacgtgtg
gtcgccaagtacaaggacggcaacctggtgtggttgtacgcaggaatagtcgcagagatg
cccaacaataaaaaccgtatgaggttcctcatattttttgacgatggctacgcttcttat
gtaacactacctgagctcttccccgtctgtcgaccgatgaaacgtacctgggaggacata
gaggacgcgtcgtgtcgagacttcatagaggagtacatcactgcgtatcccagcaggccc
atggtgctgctgaaggtcaaccagatcatcaagacagaatgggagggcacctggtggaag
agcaaagtggaggacgttgacggcagcttggtgaagattctcttcctggatgataaaagg
agtgagtggatctacagagggtccaccaggttggagcccatgttcaatctgaagatgacc
acagccaacacccaggagaagaagctggccggccagcagaggacacgaccaaatatgggc
gcgttgaggagcaaaggtccagttgtgcagtacaccagtgatggactagtgggagcctct
cctgtcaaaaccacacagatcaccgtgtctccgtccccaccgactgtacagccccgtcct
ctgctagcacaacccccgcaaattcaaccaagcccccagccacgcatggacaccaaacat
cagatggcaaagaagagcacctcaccatttgtccccggggtggggggcacacatgcttct
aaagtcatgcagtctctttcgtccacttcctccaacctccctggacctgctgctgtaaca
atccacagaggaagaacgctgaatcctccgactatcacctaccagagacagcagtccaca
ccagcacctgtccaccccgttatgacccgcgccgtgtccaccgtcccacaacaggccccc
taccgcgcccctacagaccgcatcttctacatggtgcacacgtgtcagcccgcctgtctc
aaccgcgtccgaccctccaaatcagacgttcacagagggaagaaccccctcctcacaccg
ttactctacgacttcagacggatgataggaagacgcaaagtcaaccgcaagatgttcttc
catgtgatctacaaggccccgtgtggactctgtcttcgtaacatgccagagatccagaac
tacctcttcctgacacagtgtgactttatattcttggagatgttctgtttggacccctat
gttctcgtggaccgccgcttccagcctcagaagccgtgctattacattccagacatcact
gatggaaaagaggacatccccctttcctgcgtcaatgagattgattccactccaccgcct
gacgtagcctacagtaaagaacgtattcctgaagatggagtgtttatcaacaccagctcc
gacttcctggttggatgtgattgtaccgacggatgtctagacaaatccaagtgctcctgt
catcagctgacgctgcaggccacaggttgtactccaggtggtcagatcaaccccaacgct
ggatatttgtacaaacgattagaggagtgcctgcccacgggcatctacgaatgtaacaaa
cgctgcaaatgctgtgctgagatgtgcacaaaccgcctcgttcagcacggcctgcaggtg
cgtctccagcttttcaagacccagaataaaggctggggcattcgctgtctggacgatgtc
gccaagggttcttttgtctgcatctacgctggtaaaatcctgacggatgactttgcagat
aaagagggtctggaaatgggtgatgagtacttcgcaaatctagatcacattgaaagtgta
gagaactttaaggagggctacgagagcgaggctcactgttcagacagcgagggcagcggt
gtggacatgtccaggatgaaggtcaaacccggtgtgtcgtcatctcagtcgggtgcccag
cacacagcccaaagccagagctcctcggacagcaacgacgcggacgacaaggactcgaag
agtgaagaggagagtgacagttcagacgacacgtttgtcaaagacaacttctacaccccc
agctctgtgtggaggagctacaccacacggggtcaggccaagggcaacaaagaagggagt
caggacagtaaagacggacttggtggtgcggccaaggaaacaagtgaacagaaaccaccg
tcgatgccagaggagacgggaaaaagtaaagtagcttcatggctgacgagtcaggggcta
aagaaggactcaggagacagcaagagtcaagtaaagtcagaaacaggaaaaaagcaggat
gtgatgacgctgtctgacagtgacgacgttcagaccatcagctctggatctgatgacaac
aaagagaaagaaaaaatcataccaggtttgaccaagaagcaggtggcagttaaatcgact
cgcggcattgctctgaagaccagccatggtatgatggtaaaatcaggaacaccaggagga
agtggaggtcaggggggtcagggaagcaaaacaggacaacaaggccagaccgcaggaggc
ggagaaaacatttccaaaaacaccagactgttctttgacggcgaggagtcctgctacatc
attgatgccaagttggaaggaaatcttgggcgatacctcaaccacagctgtagtcccaac
ctcttcgtccagaatgtctttgtggatacgcacgatttacgattcccctgggtggctttc
tttgccagcaagcggatcagggccggcacagaattgacctgggactacaactatgaggtg
ggcagcgtggagggtaaagtcctgttgtgctgctgtggatccacagagtgcagaggacga
ctgctgtga

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