KEGG   Cynoglossus semilaevis (tongue sole): 103392367
Entry
103392367         CDS       T04866                                 
Symbol
itgav
Name
(RefSeq) integrin alpha-V
  KO
K06487  integrin alpha V
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem04145  Phagosome
csem04148  Efferocytosis
csem04510  Focal adhesion
csem04512  ECM-receptor interaction
csem04514  Cell adhesion molecules
csem04810  Regulation of actin cytoskeleton
csem04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:csem00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103392367 (itgav)
   04514 Cell adhesion molecules
    103392367 (itgav)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    103392367 (itgav)
   04148 Efferocytosis
    103392367 (itgav)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103392367 (itgav)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103392367 (itgav)
   04810 Regulation of actin cytoskeleton
    103392367 (itgav)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csem04131]
    103392367 (itgav)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csem04147]
    103392367 (itgav)
   04515 Cell adhesion molecules [BR:csem04515]
    103392367 (itgav)
   04090 CD molecules [BR:csem04090]
    103392367 (itgav)
Membrane trafficking [BR:csem04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    103392367 (itgav)
Exosome [BR:csem04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103392367 (itgav)
  Exosomal proteins of epithelial cells
   103392367 (itgav)
Cell adhesion molecules [BR:csem04515]
 Integrins
  Integrin alpha subunits
   103392367 (itgav)
CD molecules [BR:csem04090]
 Proteins
  103392367 (itgav)
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 ITGAX-like_Ig_3 Integrin_alpha LYRIC
Other DBs
NCBI-GeneID: 103392367
NCBI-ProteinID: XP_008327192
UniProt: A0A3P8WC92
LinkDB
Position
16:16098639..16121167
AA seq 1043 aa
MVEIGFSCYRLLLLLLVSPGFGFNLDEEAPSVFSGPDGSFFGFSVDFFKSTGSLRSDVLV
GAPRANTSGVSAVVERGAVYSCPWTNSASCQQLQFDNTDDRTSNGAQMEFKSKQWFGASV
RSDGEHILACAPLYQWSTYGGTEREPVGTCFLKKGGTVVEYSPCRSSANTPEGQGFCQAG
FSADFLKKNKRVVVGGPGSFYWQGQLISDDISEIFARFKRDFVTPYGNSLFTKSAGALYD
DSYLGYSVTVGDFNNDGTEDYVTGVPRGDKALGYVNIFNGLNMESMVNFTGTQMAAYFGH
SVAAVDVNDDGLMDLLVGAPLFMDRGSDGKLKEVGQVSVFLGSGGFSFHPPQTLTGSEVY
ARYGSAISSLGDLNMDGYNDVAISAPYGGSAHNGLVYIHNGGPKGPDPNPSQMLQGKWAS
STMPPSFGYSMNGNIDIDQNGYPDLIVGVFGADKAVLFRARPVIRVNATLDVSPQMINPE
EKKCPLPGSSTAVSCFKVKYCLKASGSGAPAKLNFRVELTLDRLKQKETTKRVLFLHSRS
FSYAKNMTVNNGQGPACEEQDVFLRDDRDFRDKITPISVMMLFTLDQQQAADKTGLKPIL
DPSAPNNVTKQAHILLDCGEDNVCKPDLRLSVKSDRDQIFIGDDNALTLEVSAENQGEGA
YEAELHVFPPPQADFTGVVRSKTLSRLSCAYKKENQTKMVVCDLGNPMKGGTKLLAELRF
SVHQLSEEDTSVKFDLQITSSNQFDNTSPRVSSVTNLAVMAKVFIRGSSSPSQVLLPITN
WKPKQPPTTDDDIGPPIVHVYELLNSGPSTISKASLDVLWPHRLKDDFLLYITSFKTDGP
INCTTDQEINPLNVSTPLTSQKNTSVVPPRERETEGRNRNHVQKRDVETRDSQSDQQILD
CATADCLKLRCQVGRLERKQNAILYISANLYVSTFLKPEHQNRSFEVRSSASFSVIEMPY
KNLVSELPSNSTTMSVWVMWVADAPQSVPIWVVILAVLAGLLLLALLIFIMYKLGFFKRV
RPPQDDCAEKEQLQPEENGNADS
NT seq 3132 nt   +upstreamnt  +downstreamnt
atggtggaaataggtttttcctgctaccgtcttcttcttcttctacttgtttctcccggt
ttcggcttcaacctggacgaggaagcgccgtcggttttctctggaccggacggaagtttc
tttgggttctccgtggacttctttaaatccactggcagtttacggtcagatgtcctggtc
ggagcgcctcgggccaacacctccggtgtcagcgcagtggtggagcgaggagccgtgtac
agctgcccctggaccaactccgcttcctgtcagcagttacagtttgacaacacagacgac
agaactagtaatggagcacagatggagtttaaatcaaagcagtggtttggagcttctgtc
cgctctgatggagaacacatcttggcctgcgctcctctctatcagtggtccacatatgga
gggacagaaagagaacctgttggaacttgttttctaaagaaaggaggaacagtggtggag
tactcgccctgcagatccagtgccaacactccagagggacagggcttctgtcaggctggt
tttagtgctgacttcttgaagaaaaacaaacgagtcgtggtgggaggacctggaagcttc
tactggcagggtcagctgatctccgatgacatctcggagattttcgctcgttttaaaaga
gactttgtgactccgtacggaaactctctgttcaccaagtctgcaggagctctgtacgac
gacagttacctgggatattctgtgactgtgggagactttaataatgatgggacagaagat
tacgtcactggagttcctcgaggagataaagctctgggttacgtgaacatcttcaacggc
ctcaacatggagtcaatggttaatttcacaggaactcagatggcggcgtactttggacac
tcagtggctgctgtggacgtcaatgacgacggtttgatggatctcctggtaggagctcca
cttttcatggaccgaggttcagatgggaaactgaaggaggtgggacaggtcagtgtgttc
ctgggttctggtggattctccttccatcctcctcagactttaactggatcagaagtttat
gccagatatggatcagccatcagttcactgggagatctgaatatggatggatacaacgat
gtggccatctctgccccctatggaggctctgctcataacggtctggtttatatccacaac
ggtggacccaagggtcctgaccccaacccctcacagatgttgcaggggaaatgggcgtcc
agtacaatgccacctagttttggatattcaatgaatggaaacatcgacattgaccagaac
ggctatccagatttaatagttggggtctttggagcagacaaagcggttttattcagagct
cgtcctgtcatccgtgtcaacgcgacattggacgtctcaccacagatgatcaatccagag
gaaaaaaagtgcccacttccaggaagcagcacagcagtttcctgttttaaggtgaaatac
tgcctgaaagccagcggtagtggagctccagctaagctcaatttccgagtggaactgact
ctggatcgactgaagcagaaggaaacgacaaagcgcgttcttttccttcacagtcgaagc
ttcagctacgccaaaaacatgacagtgaacaacggacaaggaccggcctgcgaggaacag
gacgtcttcctcagagatgaccgcgacttcagagataaaatcactccaatatcagtgatg
atgttgttcactttagatcaacaacaggctgcagataaaactggtttgaaacccatcttg
gacccatctgctcccaacaacgtcaccaaacaggctcatatccttctggactgtggtgag
gataacgtttgtaaacctgatctcaggttgtcagtgaagagtgatcgcgatcagatcttc
attggcgacgacaacgcactgacgctggaggtgtctgctgagaatcagggagagggcgcc
tatgaggctgagctccacgtgtttcctcccccgcaggctgacttcaccggagtggtccgc
agtaagactctgtctcgtctctcctgcgcctacaagaaggagaaccagacgaagatggtg
gtttgtgacttggggaacccaatgaagggtggaaccaaactgttggcagagctgaggttc
agcgttcaccagctgtcagaggaggacacctcagtcaagtttgacctccagattacaagc
tcaaaccagtttgacaacaccagtcctcgggtttccagtgtgactaatttagctgtgatg
gccaaggtcttcatcagagggtcctcatctcctagtcaagttctcctccccatcaccaac
tggaaacctaaacaacctcctactactgatgatgacatcggacctcccatagtgcacgtc
tatgagctgctgaacagtggccccagcaccatcagtaaagcctctctggacgtcctgtgg
ccacacaggcttaaggacgacttcctgctctatatcaccagcttcaagacggatggaccg
atcaactgcaccaccgaccaagagataaacccactcaatgtttcgaccccgttgacatca
cagaagaacacaagcgtggtcccacccagagaaagagagactgaaggacgaaacaggaac
cacgtccagaaaagagacgtggaaaccagggacagtcagagtgaccagcagatactggac
tgtgccacagctgattgtctgaagctccgctgtcaagtcggccgcctggagagaaaacaa
aatgccattctctatatctctgctaacttgtatgttagcaccttcctgaagcctgaacac
cagaaccgctccttcgaggtccgatcttcagcttccttcagtgtcattgagatgccctac
aagaacctggtgtcggagctgccttcaaacagtaccacaatgagtgtctgggtcatgtgg
gtcgctgacgctcctcagtcagttcccatctgggtggtgattctggcagttctcgctggg
cttttgctgctggcacttcttatcttcatcatgtacaagctggggttctttaagcgtgtg
cgccccccacaggacgactgtgctgagaaggaacagttgcagccagaggagaatggaaat
gcggattcctag

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