Cynoglossus semilaevis (tongue sole): 103394958
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Entry
103394958 CDS
T04866
Symbol
gabra1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
103394958 (gabra1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csem04040
]
103394958 (gabra1)
Ion channels [BR:
csem04040
]
Ligand-gated channels
GABA-A
103394958 (gabra1)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
103394958
NCBI-ProteinID:
XP_008330682
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Position
19:complement(4917872..4940782)
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AA seq
461 aa
AA seq
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MCGWSRRAFLYLWACLLVANSVLSGKSSGQNGMTDEQKDNTTVFTKILDSLLDGYDNRLR
PGLGERVTEVKTDIFVTSIRTTTSHLQEYTIDVFFRQSWRDERLRFKGPMSVLRLNNLMA
SKIWTPDTFFHNGKKSVAHNMTMPNKMLRIEEEGTLLYTMRLTVRAECPMHLEDFPMDAH
ACPLKFGSYAYTRAEVAYVWTRGAAQSVVVAEDGSRLNQYDLMGQSVDSGVLQSSTGEYV
VMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSI
SARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKQKKKK
DSLLKKNNTTAYPAATATAFAPNIARDPGLATIAKSAPPPPTEPKEEPKPKPPEAKKTFN
SVSKIDRIARIAFPLLFGTFNLVYWATYLNKKPKLQGMNPH
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggatggagcaggagagcctttctctatctgtgggcttgtttgcttgttgccaac
agcgtattgagtgggaaaagctctgggcagaatggtatgacagatgaacagaaagataac
actacggttttcaccaagatcttagatagccttctggacggctatgacaatcgcctcagg
ccaggactaggagagcgtgtaactgaagtcaagactgacattttcgtgactagtattcga
accacgacatcccacctgcaggagtacaccattgatgtcttcttcagacagagttggagg
gatgagagactgaggttcaaaggccccatgtcagtgcttcgtctcaacaacctgatggcc
agcaagatctggaccccagataccttctttcacaatggaaagaagtcagtggcccacaac
atgaccatgcccaacaaaatgctgcgaattgaagaggaaggcactctgctctacactatg
aggcttacggtgcgagcagaatgtcctatgcacctggaagacttcccaatggacgctcat
gcatgtccactgaagtttggaagctacgcctacactcgagccgaggtggcgtatgtgtgg
accagaggagctgcccagtctgtggtggtggcagaggacggttccaggttaaaccagtat
gatctgatgggacagagtgtggattctggggtgttgcagtccagcacaggagagtatgtg
gtgatgacaacccatttccacctgaagaggaaaattggttactttgtgatccagacgtac
ctcccctgcatcatgactgtcatcctttcccaagtctcattttggctcaacagagagtcc
gtccctgctaggactgtttttggagtgaccactgtcctgaccatgaccacgctcagtatc
agtgctaggaactctctacctaaagtggcctacgccacagccatggattggttcatcgct
gtctgctacgcttttgttttctctgctctcatcgagttcgccaccgtcaactacttcacc
aagagaggttatgcctgggatggaaaaagtgtggtgccagagaagcaaaagaagaagaag
gattccctcctgaagaaaaacaacactacagcctacccagctgccactgcaacagccttc
gcacccaacattgccagagacccaggactggccactattgccaaaagtgcaccaccacct
ccaactgagcccaaggaggagccaaaacccaagcctccagaggccaagaaaacatttaac
agtgtgagcaagatagacaggattgccagaatagcatttcccctgctctttggaaccttt
aacttggtctactgggcaacctacttgaataagaagcccaaactgcaggggatgaatcca
cactaa
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