Clostridium septicum: CP523_00965
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Entry
CP523_00965 CDS
T06069
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
csep
Clostridium septicum
Pathway
csep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CP523_00965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csep03400
]
CP523_00965
Enzymes [BR:
csep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CP523_00965
DNA repair and recombination proteins [BR:
csep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CP523_00965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
PriA_CRR
YjdM_Zn_Ribbon
zinc-ribbons_6
SLFN-g3_helicase
TF_Zn_Ribbon
AAA_30
DUF1258
zf-CHY
AAA_19
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AYE35790
UniProt:
A0A9N7PKL4
LinkDB
All DBs
Position
complement(219856..222051)
Genome browser
AA seq
731 aa
AA seq
DB search
MYADIIVNSDALDIDRTFTYEVPENLKKLVEIGQLVKVPFGIKNNITYGFIINIIEKEQI
AGIRIKKIKSIFLQDPILTADDFKLIKFLRENYLCKYIDAIRIMIPHGVLRGVKPKNKKV
IVFVKDILDYKKNQRYKDVLEFVKSNSRKFTKAELTKEYSLSLYKINKLIEEGYIEVEEE
KVNRYNSKAYDNFDEKPLTEEQFLALKKIKSTDKNIILLKGVTGSGKTEIYMRLVDEGLK
AGKSSIILVPEISLTPQMIERFKGRFGNEVALFHSKLSDGERFDEWYRVKEGKAKVIIGA
RSAVFLPANNIGFIIVDEEHENTYKSEQNPKYQTKEVAEFISKLKGCKVILGSATPSIEN
YYRAISGEIELVELKNRVDSKDMPKMEIVDMRRELKSGNISLFSSKLYNEIKEALDRKEQ
IILFLNRRGFSTFVSCRSCGYVFKCPNCDISMTYHKNGFLVCHYCGKVEKQPKLCPKCQS
KYVKFFGAGTQRVEEEVLKYFKNVKVLRMDAETTKNKNSHELIYNSFKNGEADILIGTQM
ISKGLDFENVTLVGVLAADISINVPDFRAAERTFQIITQVSGRAGRGNKEGKVIIQTYTP
EHYSLLYARNYDYEGFYNEEFAIRGLMSYPPFGKILLVNGISKDEGKLKAFMNSISMEFR
NIKKEYENIEMLGPVPCIITKIKENYRWQILFKGDISIEFCKKIKDRLYDLNKNVYNEIR
VTIDINPNNLA
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atatatgcagatataatagtaaatagcgatgcattagatatagatagaacatttacttat
gaggtacctgaaaatttaaaaaagttagtagaaattggtcagttagttaaagttccattt
ggtattaaaaataatattacttatggttttattataaatattatagagaaagaacaaatt
gcaggaattagaataaaaaagataaaatcaattttcttacaagatcctatattaacagct
gatgattttaaattaattaaatttttacgggaaaactatttatgcaagtacattgatgct
ataaggattatgattcctcacggagttttacgaggagttaaacctaaaaataaaaaagtt
atagtttttgtaaaagatatacttgattataaaaaaaatcaaagatataaagatgtatta
gaattcgtaaagtctaatagcagaaagtttactaaagctgaattaacaaaagaatattca
ttatctttgtataaaataaataaacttattgaagaaggatatatagaagtagaagaagaa
aaagtaaatagatataatagtaaagcatatgataattttgatgaaaaaccattaacagaa
gaacaatttttggctctaaaaaaaataaaatctacggataaaaatattattcttctaaaa
ggtgttacaggttcaggaaaaacagaaatttatatgagacttgttgatgaaggattaaag
gctggaaaatcttctataatattagtgccagaaatatcattaactccacaaatgatagaa
aggtttaaaggtaggtttggaaatgaagtagctttattccatagtaagctttcagacgga
gaacgctttgatgaatggtatagagtaaaagaaggtaaagctaaagtaattataggagca
agaagtgcagtatttttaccagccaataatattggttttataattgtagatgaagagcat
gaaaatacttataaatcagaacaaaatcctaaatatcaaacaaaggaagttgcagagttt
ataagtaagttaaaaggatgtaaagttatattaggttcagcaactccaagtattgaaaat
tactatagagcaatttcaggggaaatagaacttgttgaattaaagaatagagtagattca
aaagatatgcccaaaatggaaattgttgatatgaggagagaattaaagtctggtaatata
tcattatttagtagtaaattatataatgagataaaagaggcattagatagaaaagagcaa
ataatattatttttaaatagaagaggattttctacttttgtttcatgtagaagctgcgga
tatgtatttaaatgtccaaattgtgatatttctatgacttatcataaaaatggattttta
gtttgtcattattgtggtaaagtagaaaagcagcctaaactttgtccaaaatgtcaaagt
aaatatgtgaaattttttggagcaggaacacagagggtagaagaagaggttttaaaatat
tttaaaaatgtcaaagttttaagaatggatgcagaaaccacaaaaaacaagaactctcac
gaattaatatacaattcttttaaaaatggagaagctgatattttaattggtacacaaatg
atatcgaaaggtttagattttgaaaatgttacacttgtaggagttttagccgctgatatt
tcaataaatgtacctgattttagagcagctgaacgaacttttcaaataataactcaagtt
tcaggaagagctggaagaggaaataaagaaggaaaagtaataatacaaacatatacacca
gaacattatagtttattgtatgcaaggaattatgattatgaaggattttataatgaagag
tttgcaataagaggtttgatgtcttatccgccttttggtaaaatactattagtcaatggt
atatcgaaagatgagggtaagcttaaagcttttatgaatagcataagtatggagtttaga
aatataaaaaaagaatatgaaaatatagaaatgttagggcctgtaccatgtataataact
aaaataaaagaaaattatagatggcaaattttatttaaaggagatatttctatagaattt
tgtaaaaaaattaaggatagactttatgacttaaataagaatgtatataatgaaattaga
gtaactattgatatcaacccaaataatttagcatag
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