Comamonas serinivorans: CCO03_16725
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Entry
CCO03_16725 CDS
T04892
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
cser
Comamonas serinivorans
Pathway
cser03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cser00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CCO03_16725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cser03400
]
CCO03_16725
Enzymes [BR:
cser01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CCO03_16725
DNA repair and recombination proteins [BR:
cser03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CCO03_16725
RecFOR pathway proteins
CCO03_16725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
nSTAND3
AAA_14
AAA_22
AAA_16
AAA_3
Rad17
AAA_18
NTPase_1
RNA_helicase
TsaE
DUF815
AAA_33
Bac_DnaA
AAA_17
Sigma54_activ_2
AAA_28
AAA_19
NB-ARC
ABC_tran
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ARU06093
UniProt:
A0A1Y0ER62
LinkDB
All DBs
Position
complement(3923889..3924950)
Genome browser
AA seq
353 aa
AA seq
DB search
MSIKTDDFDLPDPPPRVVSAAPLSAGEDALERALRPKLLDDYVGQAKAREQLEIFIGAAR
KRGEALDHVLLFGPPGLGKTTLSHIIAHELGVNLRQTSGPVLEKPKDLAALLTNLEANDV
LFIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSIKLDLQPFTLVGATTRAGMLTN
PLRDRFGIVARLEFYTPEELARIVRRSAGLLNVPADAAGAFEIARRSRGTPRIANRLLRR
VRDYADVKGEGVITEPIAQAALAMLDVDPEGFDLMDRKLLEAVIHRFDGGPVGLDNVAAA
IGEEPGTIEDVIEPYLIQQGFLQRTPRGRVATLAAFRHLGVTPPQNQGSGGLF
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
gtgagcatcaagaccgacgatttcgacctgcccgacccgccgccgcgcgtggtgtcggcc
gcgcccctgtccgcgggcgaagacgcgctcgagcgggccttgcgccccaagctgctcgac
gactatgtgggccaggccaaagcgcgcgagcagctcgagatcttcattggcgcagcgcgc
aagcgcggtgaggcgctggaccacgtgctgctgttcggcccgcccggcctgggcaagacc
acgctctcgcacatcatcgcgcacgagctgggggtgaacctgcgccagaccagcggcccc
gtgctcgagaagcccaaggacctggcggcgctgctgaccaacctcgaagcgaacgatgtg
ctgttcatcgacgagatccaccgcctgtcgcccgtggtcgaggaaatcctgtaccccgcg
ctggaggactaccagatcgacatcatgatcggcgagggcccggccgcgcgcagcatcaag
cttgacctgcagcccttcacgctggtcggcgcgaccacgcgcgcgggcatgttgaccaac
ccgctgcgcgaccgcttcggcatcgtcgcgcggctggagttctacacgcccgaggaactg
gcgcgcatcgtgcgccgcagcgccggcctgctgaacgtgccggccgacgcggccggcgcc
ttcgagatcgcgcgccgctcgcgcggcacgccgcgcatcgccaaccgcctgctgcgccgc
gtgcgcgactacgccgacgtgaagggcgagggggtcatcaccgagccgattgcccaggcc
gcgctggccatgctcgacgtggaccctgaagggttcgatctgatggaccgcaagctgctc
gaggctgtgatccaccgtttcgacggcggccccgtgggcctggacaacgtggccgcggcg
atcggcgaagagcccggcaccatcgaagacgtgatcgagccctacctgatccagcagggt
tttctgcagcgcacgccgcgcggccgcgtcgccacgctggcggcgtttcgccacctgggc
gtgacgccaccccagaatcaaggatcaggcggtctgttttga
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