Clostridium saccharolyticum WM1: Closa_0523
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Entry
Closa_0523 CDS
T01288
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
csh
Clostridium saccharolyticum WM1
Pathway
csh01501
beta-Lactam resistance
csh01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Closa_0523
01503 Cationic antimicrobial peptide (CAMP) resistance
Closa_0523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csh03036
]
Closa_0523
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csh02000
]
Closa_0523
01504 Antimicrobial resistance genes [BR:
csh01504
]
Closa_0523
Chromosome and associated proteins [BR:
csh03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Closa_0523
Transporters [BR:
csh02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Closa_0523
Antimicrobial resistance genes [BR:
csh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Closa_0523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
Biotin_lipoyl
PTS_EIIA_1
Tudor_4
Motif
Other DBs
NCBI-ProteinID:
ADL03159
UniProt:
D9R446
LinkDB
All DBs
Position
588447..589589
Genome browser
AA seq
380 aa
AA seq
DB search
MIKKKTFIIAGAVVIVAAVAGLTFPKLMEGKKKELVAEVPPAVTAEKPQVRTIELSSELV
GTIEPDSIVHVMPLGAGEVTSVGVKTGDLVSAGQLLCVIDTKQVESSGITMETTRITYED
AKKNLDRMTVLHAAGDVAEADYQSLVDKVEMARLQYENAKIAYKIQTDSSQVTAPISGRV
ESFNISVHDMVSPQTTLCVISGEGGKSLTFYVSERIVGGLKAGDTIKVEKNGTNHEASIT
EVSTMIDPASGLFKVKASIPNGDSLATGTSVKLYVVSQRAESVLTVPVDSVYYEGGNPFI
YTYADGVLKKNAVTVGLSDNEFIEVQSGISADDQVVTTWTSELYDGSKVTLVENSGNKPE
AAEGTAEAEGTETEASGPAQ
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgataaagaagaaaacattcattattgcaggggcagttgtcattgtggcggcagtggca
ggactgacttttccaaagctgatggaaggaaaaaagaaagagcttgtggcagaggttccg
cctgccgtgaccgctgaaaaacctcaggtcaggaccattgaattaagcagtgagctggtc
gggaccatagagccggacagcattgtccatgttatgccccttggggccggtgaggtcaca
agtgttggggtgaaaaccggcgatttggtatctgcgggccagcttctctgtgtcatcgac
acaaagcaggtggaaagctccggaattaccatggagaccaccagaatcacctatgaagac
gcgaaaaagaatttagaccggatgacggttttacacgcagccggagatgtggcggaggcg
gattatcagtctctggttgataaggtggaaatggcaaggctccaatatgagaatgccaaa
attgcgtataagattcagacggatagcagtcaggtaacggctcctatatctggacgggtg
gaaagctttaatatcagcgtacatgatatggtgtctccccagaccaccctttgcgtcata
tcaggagaaggggggaaatccctgaccttctatgtttcagaacgaatcgtaggaggattg
aaggctggagataccatcaaagtagaaaagaacggaaccaatcatgaagcgtccattacg
gaagtgagcactatgattgacccggcaagcggtttattcaaggtaaaggcatccattccc
aacggagattctctggcaacgggaacttccgtgaagctatacgttgtttcccaaagggcg
gaaagtgtcctgacggttccggttgacagcgtttattatgagggcggcaatcccttcatc
tatacatatgctgatggagttctaaagaaaaatgcagtgaccgtaggattatcagacaat
gagttcatagaagtccaaagcggcatctccgcggatgatcaggtagtgaccacatggacc
agtgagttgtatgatggttccaaggtaacccttgttgaaaatagcggaaataaaccagag
gcagcagaaggcacggcagaagcagaaggaaccgagacggaagcttccggtcctgcacag
taa
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