Clostridium saccharolyticum WM1: Closa_2237
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Entry
Closa_2237 CDS
T01288
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
csh
Clostridium saccharolyticum WM1
Pathway
csh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Closa_2237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csh03400
]
Closa_2237
Enzymes [BR:
csh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Closa_2237
DNA repair and recombination proteins [BR:
csh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Closa_2237
RecFOR pathway proteins
Closa_2237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
RNA_helicase
TIP49
AAA_16
Resolvase
Bac_DnaA
nSTAND3
AAA_3
TsaE
NB-ARC
Sigma54_activ_2
MCM
AAA_17
AAA_18
AAA_14
AAA_28
AAA_24
DUF815
AAA_11
AAA_33
Motif
Other DBs
NCBI-ProteinID:
ADL04815
UniProt:
D9R366
LinkDB
All DBs
Position
complement(2409746..2410744)
Genome browser
AA seq
332 aa
AA seq
DB search
MERRIITTEVTEEDKRIEPNLRPKYLEEYIGQEKIRTNLKVYIDAAKARGESLDHVLFYG
PPGLGKTTLSAIIANEMGVNMKVTSGPAIEKPGEMAAILNNLQEGDVLFVDEIHRLNRQV
EEVLYPAMEDFAIDIMLGKDSSARSIRLDLPKFTLVGATTRAGLLTAPLRDRFGVVQKLE
FYTPQELKIIVCRSARVLQVEIEEEGAAEIAKRSRGTPRLANRLLKRVRDFAQIKYNGTI
TKEVADFALDILDVDKLGLDCNDRAILTTMIEKFAGGPVGLDTLAASLGEDAGTLEDVYE
PYLLMNGFINRTSRGRVATERAYEHLGIPMGS
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtagaattataaccacagaggtaacagaagaagataaaaggattgaaccgaac
ttaaggccaaaatacctggaagagtacattggacaggagaagatacggaccaatttaaaa
gtatatatcgatgccgccaaggcaagaggtgaatccctggatcatgttttattttatggg
ccacccggtctgggcaaaaccaccctttcggcaattatcgccaatgaaatgggagttaat
atgaaggtcacatcaggacctgcaatcgaaaagcctggggagatggccgccatactgaac
aatcttcaggagggggacgtactgtttgtcgatgaaatccatcgcttaaaccggcaggtg
gaagaggttctgtatccggccatggaggattttgccatagatatcatgcttggaaaggat
tcttccgccagatcgataaggctggatcttcctaagtttactttggttggggcgactacc
agggcaggacttttgactgcccctttaagagacaggttcggtgtggtccaaaaactggag
ttttacacgcctcaggagcttaagatcattgtctgccggtcggccagggtcctccaggtg
gagatcgaagaagaaggggcggcagagattgccaagcgctccagaggaactcccaggctg
gcaaaccggctgttaaaaagagtgcgggatttcgcacagataaaatacaacggtaccatt
acaaaggaagtggcagattttgcccttgatatcctggatgtggataagctgggtctggat
tgtaatgacagggccatccttactacaatgattgagaaattcgccggcggccccgtaggg
ctggatactcttgcagcttccctgggagaggatgccggaaccctggaagatgtttatgag
ccttatcttctgatgaacggttttatcaaccgcacctccaggggccgcgttgcaacggag
cgggcatatgaacatcttgggatccccatgggatcatga
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