Clostridium saccharolyticum WM1: Closa_2895
Help
Entry
Closa_2895 CDS
T01288
Name
(GenBank) isoleucyl-tRNA synthetase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
csh
Clostridium saccharolyticum WM1
Pathway
csh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Closa_2895
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csh01007
]
Closa_2895
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csh03016
]
Closa_2895
Enzymes [BR:
csh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
Closa_2895
Amino acid related enzymes [BR:
csh01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Closa_2895
Transfer RNA biogenesis [BR:
csh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Closa_2895
Prokaryotic type
Other AARSs
Closa_2895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
DUF5915
Anticodon_1
tRNA-synt_1g
tRNA-synt_1e
tRNA-synt_1f
tRNA-synt_1_2
PRA-CH
Motif
Other DBs
NCBI-ProteinID:
ADL05433
UniProt:
D9R701
LinkDB
All DBs
Position
complement(3120601..3123714)
Genome browser
AA seq
1037 aa
AA seq
DB search
MYKKVPTDLNFVAREKEVETFWEDHQIFKKSMENRREAETYTFYDGPPTANGKPHIGHVL
TRVIKDMIPRYRTMKGYDVPRKAGWDTHGLPVELEVEKMLGLDGKEQIEEYGLEPFIKYC
KESVWKYKGMWEDFSKTVGFWADMDDPYVTYENNFIESEWWALKQIWERGLLYKGFKIVP
YCPRCGTPLSSHEVAQGYKDVKEHSAIVRFKVKGEEAYILAWTTTPWTLPSNVGLCVNPD
ETYVKVQNGDHTYYLAEALCEKVLEGEYTVLERYQGKDLEYKEYEPLFDFVKPNKKAHYV
TCDHYVTLTDGTGVVHIAPAFGEDDSKVGRKYDLPFVQLVNAAGEMTEETKWAGVFCKKA
DPMILKDLKERGLLFSAPLFEHSYPHCWRCDTPLIYYARESWFIKMTDVKEDLIRNNNTI
NWIPESIGKGRFGDWLENVQDWGISRNRYWGTPLNVWECQCGHQHSIGSIDELKAMSPNC
PEDIELHRPYIDTVTITCEKCGKQMKRVPEVIDCWFDSGSMPFAQHHYPFENKELFEKQF
PADFISEAVDQTRGWFYSLLAISTLIFNKAPYKNVIVLGHVQDENGQKMSKSKGNAVDPF
DALETYGADAIRWYFYVNSAPWLPNRFHGKAVMEGQRKFMGTLWNTYAFFVLYANIDEFD
PTKYSLEYEKLPVMDKWLLSKLNTLVGEVDACLNGYQIPEAARALQEFVDDMSNWYVRRS
RERFWAKGMEQDKINAYMTLYTALITVSKTAAPLIPFMTEEIYQNMVCSVDQSAPESIHL
CDYPAANQAYIDRQLETDMDEVLKIVVMGRAARNTANVKNRQPIGQMFVKAPHALPVFYQ
EIIEEELNVKKVVFTDDIRDFTSYSFKPQLKTVGPKYGKQLGDIKKALSEINGNEAMDTL
NETGALTFLFGDTEVVLTRDDLLIDTAQTEGYVSEGDNAITVVLDTNLTPELLAEGFVRE
LISKIQTMRKEAGFEVTDHIAVYSKGNDKIAGILKIHEEEVKREVLAEDIILETLAGYVK
EWNINGENVTLGVEKFQ
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgtacaagaaagtccctacagacttgaattttgtagcacgagaaaaagaggttgaaacg
ttctgggaagatcatcagatttttaaaaagagcatggaaaaccgcagggaggcagaaacc
tatacgttttatgacggtccgcccacggccaatgggaaaccccatatcgggcacgtactg
accagggtcatcaaggatatgatcccaagataccgtaccatgaagggttatgacgttccc
cgtaaagcaggctgggatacccacggacttccggtggagctggaagtggaaaaaatgctg
ggccttgacggaaaggaacagatcgaggaatatggcctggagccatttatcaagtattgc
aaggaaagtgtttggaaatacaaaggcatgtgggaggatttttcaaaaaccgtcggcttt
tgggctgatatggatgacccatatgtgacctatgaaaataattttattgaatccgagtgg
tgggcattaaagcagatctgggaaagaggtcttttgtacaaagggtttaaaatcgttccc
tactgtccccgctgcggaactcctttatccagccatgaggtcgctcagggatataaggat
gtaaaagaacattccgccattgtccggttcaaggtaaagggagaggaagcctatatactg
gcttggaccacaactccctggacccttccctccaacgtgggcctttgtgtgaatccggat
gagacctatgtgaaggtacaaaatggagaccatacctattatctggcagaggctctctgc
gaaaaggttctggaaggggagtacacggttttagaacgatatcagggaaaggatttagag
tataaagaatacgagcctttatttgattttgttaaaccaaataagaaagcacattatgtg
acatgtgaccattatgtcaccctgactgacggtaccggcgtagtacacattgccccggcc
tttggtgaggatgactccaaggtgggaagaaaatatgatcttccctttgtgcagctggtc
aatgcggctggcgagatgacagaggaaaccaaatgggcaggcgtcttctgcaaaaaagcg
gatccaatgattttaaaggatttaaaggaaaggggtcttttattctctgcgcctttattt
gaacacagttatccccactgctggagatgcgatactccgctgatctattatgcaagagag
tcctggttcattaagatgacggacgtaaaggaagacttgatccgtaacaacaataccatc
aactggatccccgaaagcattggaaaaggacgtttcggcgactggctggaaaatgtccag
gactggggcatcagcagaaaccgttactggggtacacccctgaatgtgtgggaatgccag
tgcggtcatcagcactccataggaagcattgatgaattaaaggcaatgtcacccaactgc
ccggaagacattgagcttcaccgtccctatattgacacagtgacaattacttgtgaaaag
tgcgggaagcagatgaaaagggtgccggaggtgatcgactgctggtttgattccggttcc
atgccgtttgcccagcaccattatccttttgaaaacaaagaactgtttgagaaacagttc
ccggctgactttatttcagaggccgtggaccagacaagaggctggttttattctctcctt
gcaatttccaccctgattttcaacaaggccccttataaaaatgtaatcgttctggggcat
gtccaggatgagaacgggcagaagatgagtaaatcaaagggaaatgccgtagatcccttt
gatgcactggaaacctacggagccgatgccatccgctggtatttctacgtaaacagtgcc
ccttggcttccaaaccgtttccatgggaaagcggtcatggaaggccagcgcaaatttatg
ggcaccctttggaatacctatgcattctttgtgctctacgcgaatattgatgaatttgac
cctacaaaatacagcctggaatacgaaaaacttcccgtcatggacaaatggcttttatcc
aagctgaatactctggtaggagaagtggatgcatgcctgaacggctatcagattccggag
gcagcaagagcccttcaggaatttgtcgatgatatgagcaactggtatgtccgcagaagc
agggaacgcttctgggcaaaggggatggagcaggataagatcaatgcctatatgaccctt
tacacggcccttattaccgtaagcaagacagcggctcccctcatcccctttatgactgag
gagatctatcagaacatggtatgcagtgtggaccagtcagcgccggagagcatccatttg
tgtgattatcctgctgcaaaccaggcctatattgacaggcagctggaaacggatatggat
gaagtgctgaaaatcgtcgtcatgggcagggccgccagaaatacggcgaatgtaaagaac
cgccagcctattggccagatgtttgtaaaagcacctcacgccctccctgtattttaccag
gagatcattgaggaagagctgaatgtgaaaaaggtagtatttactgatgatataagggat
ttcacctcctatagctttaagccccagttaaaaaccgtcggaccgaaatacggcaagcag
ctgggagatattaaaaaggcactttcagagatcaacggcaatgaagccatggacacctta
aatgaaactggcgccctcaccttcctattcggcgataccgaagtcgtactcaccagggat
gaccttcttattgatacggctcagacggagggttatgtatctgagggagacaatgccatc
accgttgttttagataccaatctcacacccgagcttttggcagagggctttgtgcgcgag
ctgatcagcaagatccagaccatgcgtaaggaagcaggttttgaggtaacggatcatatt
gcagtatacagcaagggcaatgataaaattgccggtatattaaagatccatgaggaagaa
gtgaaacgtgaggtacttgcggaagacattatccttgaaacgctggccggttatgtaaaa
gaatggaacattaacggcgaaaatgtaacattgggtgtggagaagtttcagtaa
DBGET
integrated database retrieval system
