KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_18565
Entry
COCSUDRAFT_18565  CDS       T02914                                 
Name
(RefSeq) DNA repair protein rad10
  KO
K10849  DNA excision repair protein ERCC-1
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    COCSUDRAFT_18565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csl03400]
    COCSUDRAFT_18565
DNA repair and recombination proteins [BR:csl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     COCSUDRAFT_18565
SSDB
Motif
Pfam: Rad10 HHH_5 HHH UPF0758_N
Other DBs
NCBI-GeneID: 17038383
NCBI-ProteinID: XP_005644951
JGI: 18565
UniProt: I0YPT8
LinkDB
AA seq 219 aa
NAVLVSKRQEGNPVLKHIRNVRWQFTDIVPDYQMGPNTCALFLSLRYHLLKPTYIYGRIK
ELQRAFRTRVLLCHVDVDDVVEPLAQVTKAALLNDCTLICAWSHEECARYLETYKAYESK
PADAIQGRTEEDYLSKLTAALTTVRGVNKTDVLTLGGAFKTAAGVMRANMQQLSALPGIG
PTKACPCKMHLSCSRTELVAIHMQSLDTLTRRHSEVCSV
NT seq 660 nt   +upstreamnt  +downstreamnt
aatgcggtgctggtgagcaagcggcaggagggaaacccggtgctgaagcacatacgcaac
gtgcgatggcaatttacagacatcgtgccagactaccagatgggccccaacacctgcgcg
ctcttcctcagcctgcggtaccatcttttaaagccgacatacatatacgggcgcataaag
gagctgcagagggcgtttcgcacgcgcgtgctgctctgccacgtggacgtggacgatgtt
gtggagcctctggcgcaggtcactaaagctgctctgctcaatgactgtaccctcatctgc
gcatggagccacgaggagtgtgcgcgctacttggagacctacaaggcgtatgagagcaag
ccggcagacgcgatccagggccgcacagaggaggactacctgtcaaagctgactgctgct
ctgacaaccgtgcgcggagtcaataaaaccgatgtcctcacgcttggaggggctttcaaa
acggcggccggtgtcatgcgcgccaatatgcagcagctgtctgcgctgcccggcattggg
ccgactaaggcatgcccttgcaagatgcacctttcctgctccaggacagagcttgttgca
atccatatgcaaagccttgacacgcttactcgccggcatagtgaagtgtgcagtgtatga

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