KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_37328
Entry
COCSUDRAFT_37328  CDS       T02914                                 
Name
(RefSeq) DNA mismatch repair protein
  KO
K08735  DNA mismatch repair protein MSH2
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    COCSUDRAFT_37328
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csl03400]
    COCSUDRAFT_37328
DNA repair and recombination proteins [BR:csl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     COCSUDRAFT_37328
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_I MutS_II ATPase_2 AAA_27 FHIPEP
Other DBs
NCBI-GeneID: 17039480
NCBI-ProteinID: XP_005646040
JGI: 37328
UniProt: I0YSX7
LinkDB
AA seq 909 aa
MEDPLLEAPELSKDDRSDNGFVNWFKALNQEPTLVRFFDRKDFYSVHGENALFIARTFYK
TTAVVKYMGGSATGLPGVTLNKNLFETAVRHLLVESAEYSVQMFEGSGTQWRKTREASPG
KLGAFEEELFRNVDMTDVPVVAALLLGYSEGARTVGIAFADAAGRRLGACEFADDEYFCA
TEAVLLQLGAKEVVLPKESEAAAQSADAGRLRDVVARCNALGSERPRAAFGTRNLEQDLG
RLLRSGNVEQHRDVLERPLASAALAAVIAFSDVMAVDSGHGKWSLALYDTGRYMRLDVAA
QRALNVMKQRTDANDSFSLYGLMNKGRTAMAKRLLKVWLKQPLVDLTEITERHDIVEAFA
EDPTLRERLRNLHLRGLPDIERLTRKLERKKATLADMCQLYRASSRLPMMEEAFRDHDGP
HAQLLATRYSLALWHIAAWPSTAHDDEHLAKFEELLEAAIDLDRIPDEYLICASYDADLQ
GLREEKDKVEATINKVAEDAADDLGLIMDKTIKLEWHKVANTRMRCLRITQTEEKKVRKK
LQSGRYMTLETRKDGTKFTNRPLKEAAERLQAISRSYDQRQHALVEQVVSVAATFAEVWE
GVAGMVAEMDLLAGFAELAVCAPLPYVRPTMLPADSSELKLTACRHPCVEAQDGVEFIAN
DCHMERGKSWFQVITGPNMAGKSTYIRQVGVAVLMAQVGCFVACEHARIAVRDCIFARVG
AGDCQLRGISTFMAEMLETAAILKGASAKSLVIIDELGRGTSTYDGFGLAWAISEHLMQE
IGCPTLFATHFHELTALQGPVGVANKHVETAIDEASGKLTMLYQVTEGACDQSFGIHVAE
FARFPPEVVELAKRKAAELEDFSAPAQEFSALPLDKLEPEEATARAQALYKQLLADAAQM
PTLQRLLEG
NT seq 2730 nt   +upstreamnt  +downstreamnt
atggaggaccctctcttggaagcaccagagctgagcaaggatgacagatctgataatggc
ttcgtcaattggtttaaagctctcaatcaggagcccaccttggtgcgcttcttcgacaga
aaggatttttacagcgtgcatggagagaatgcgctcttcattgcacgcactttctacaaa
acaacagctgttgtgaagtatatgggaggttccgccaccggcttgccaggcgtcacgctg
aacaagaatctctttgagaccgcagtgcggcacctgcttgtggagagcgcagagtacagc
gtccagatgttcgagggcagcggcacgcaatggcggaaaaccagggaggcatcgccgggg
aagctgggagcgttcgaggaggagctgttccggaatgtggacatgacagatgtgcctgtg
gtggcagccctgctgctgggctactctgagggtgcgaggacagttggaattgcctttgca
gacgcggcgggccggcggctgggggcgtgcgaatttgcggatgatgagtacttctgcgcc
accgaggccgttctgctgcagctgggcgccaaggaagtggtcctgcccaaggagagtgag
gcggcggcgcagtcagcagacgcagggcggctgagggacgttgtggcgcgctgcaacgcg
ctgggcagcgagcggccgcgcgccgccttcggcacgcgcaatctcgagcaggatctgggc
cgccttctccgctccggaaatgtggagcagcatcgcgacgtgcttgagcgccccctcgcc
tccgccgcgcttgccgcggtgatcgcgttcagcgacgtgatggcggtggacagcgggcac
ggcaagtggagcctggcgctgtatgacactgggcgctacatgcggctggacgtggctgcg
cagcgagcgctcaacgtcatgaagcagcgcacggacgccaacgactccttctccctttac
ggcctcatgaacaagggccgcaccgccatggccaagcgcctgcttaaggtgtggctgaag
cagccgctggtcgacttgacagagatcacggagaggcacgacatcgtggaagcctttgcg
gaagaccccacgctgcgcgagcgcctgcgcaacctgcacctccgagggctgccggatata
gagcgtctgacgcgcaagttggagcgcaagaaagccacgctggcggatatgtgccagctg
tacagggcatcctcccgcctgcccatgatggaggaggccttccgggaccatgacggccca
catgcccagctcctcgccaccaggtatagtcttgccttgtggcatattgcagcctggccc
tcaacggcgcacgacgacgagcacctggcaaagtttgaggagctgctggaagctgccata
gacctggaccgcatcccagacgagtaccttatctgcgcctcctacgacgccgacctgcag
ggcttgagggaagagaaggacaaggtggaagcgaccataaacaaggttgcagaggacgca
gcagatgatctgggcctgatcatggacaagaccatcaagctggagtggcacaaggtggcc
aacacacggatgcgctgcctgcgcatcacacagactgaggagaagaaggtgcggaagaag
ctgcagagcgggcgctacatgacgctggaaacacgcaaggacggcaccaagttcaccaac
cggccgctcaaggaagccgccgagcgcctgcaggccatctcccgctcctacgaccagcgc
cagcatgcacttgtggagcaggtggtgagcgtggcggcgacattcgccgaggtgtgggag
ggcgtagcaggcatggtggcagagatggacctgctggcaggctttgccgagctggccgtg
tgcgcgccgctgccctatgtgcggcccaccatgctgcccgccgactccagcgagctcaag
ctcaccgcctgcaggcacccatgcgtggaggcgcaggatggagtggagttcatagccaac
gactgccacatggagcgcgggaagtcctggttccaggtcatcaccggccctaacatggcc
ggcaagtccacctacatccgccaggtgggcgtggcagtgctgatggcgcaggtgggctgc
ttcgtggcgtgtgagcatgcgcgcatcgccgtgcgcgactgcatctttgcgcgcgtgggc
gcgggcgactgccagctgcgcggaatctccaccttcatggctgagatgctcgagactgcc
gccatcctcaagggggcgagcgccaagtcactggtgatcattgatgagttggggcgcggc
acgagcacgtacgacggcttcggcttggcatgggccatctcggagcacctcatgcaggag
atcggctgccccacgctcttcgccacccacttccacgagctcacagcgctgcaggggccg
gtgggtgtggcaaacaagcatgtagagacggccatcgacgaggccagcggcaagctcacc
atgctgtaccaggtgacggagggtgcgtgcgaccagtcattcggcatccacgtggcggag
tttgcgcgcttcccgcccgaagtcgtggagctggccaagcgcaaggccgccgagctggag
gacttctccgcaccggcccaggagttctcagcgctgccgttggacaagttggagccagaa
gaggcaacggcccgggcgcaggccttgtacaaacagctgctggcagatgccgcccagatg
cccacgctgcagcggctgctcgagggctga

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