Coccomyxa subellipsoidea: COCSUDRAFT_54712
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Entry
COCSUDRAFT_54712 CDS
T02914
Name
(RefSeq) TBP-domain-containing protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
COCSUDRAFT_54712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csl03000
]
COCSUDRAFT_54712
03021 Transcription machinery [BR:
csl03021
]
COCSUDRAFT_54712
Transcription factors [BR:
csl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
COCSUDRAFT_54712
Transcription machinery [BR:
csl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
COCSUDRAFT_54712
RNA polymerase III system
TFIIIB
COCSUDRAFT_54712
RNA polymerase I system
SL1/TIF-1B
COCSUDRAFT_54712
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
17037454
NCBI-ProteinID:
XP_005644030
JGI:
54712
UniProt:
I0YM67
LinkDB
All DBs
AA seq
245 aa
AA seq
DB search
MAAGPSSGPVPTQELAIDRSVHRSGIVPTLQNIVATVNLDCKLDLKTIAQKARNAEYNPK
RFAAVIMRIRDPKTTALVFASGKMVCTGAKSEEHARTAARKYAKIIQKLDFPATFKDFKI
QNIVGSCDVKFPIRLEGLNYSHGMFSSYEPELFPGLIYRMKEPKVVLLIFVSGKVVLTGG
KKREDIYEAFESIYPVLQEFRKGEAVPSAPALPSTAPARALPAAPGSTVQLGLPAPQLQL
AGPST
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgggtcctagctcggggccagtgcctacacaagagctggcaatagaccgctct
gtgcaccgctcgggcattgtgccaacgctgcagaatatcgtagcaacagtcaacctggat
tgcaagctggacttgaaaaccattgcacagaaggcacgaaatgctgagtacaatccaaag
aggtttgcagcggtgatcatgcgaatacgagatccaaagaccactgccttagtgtttgct
tctggcaaaatggtctgcactggtgcaaagagtgaggagcacgcaaggactgctgcaagg
aagtatgctaaaatcatccagaagctggacttccctgccacgttcaaggacttcaagatc
cagaacatcgtgggatcctgcgatgtgaagttccccattcgactggagggcctgaattac
agccatggaatgttctccagctacgagccagagctgtttccaggtctgatctacagaatg
aaggagcccaaggtggtgctgctcatctttgtgtcgggcaaggttgtgctgacaggtggc
aagaagcgggaggacatctatgaggcattcgagtccatctatccagtgctgcaggagttc
aggaagggggaagcggtgccaagcgcaccggccctgccctccacggcccctgcccgagcc
ctacctgctgctcccggaagcactgtacagctgggactgccagcacctcagctgcagctg
gctgggccatcaacatga
DBGET
integrated database retrieval system