KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_54712
Entry
COCSUDRAFT_54712  CDS       T02914                                 
Name
(RefSeq) TBP-domain-containing protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    COCSUDRAFT_54712
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:csl03000]
    COCSUDRAFT_54712
   03021 Transcription machinery [BR:csl03021]
    COCSUDRAFT_54712
Transcription factors [BR:csl03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    COCSUDRAFT_54712
Transcription machinery [BR:csl03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     COCSUDRAFT_54712
  RNA polymerase III system
    TFIIIB
     COCSUDRAFT_54712
  RNA polymerase I system
    SL1/TIF-1B
     COCSUDRAFT_54712
SSDB
Motif
Pfam: TBP DUF3378 DUF4295
Other DBs
NCBI-GeneID: 17037454
NCBI-ProteinID: XP_005644030
JGI: 54712
UniProt: I0YM67
LinkDB
AA seq 245 aa
MAAGPSSGPVPTQELAIDRSVHRSGIVPTLQNIVATVNLDCKLDLKTIAQKARNAEYNPK
RFAAVIMRIRDPKTTALVFASGKMVCTGAKSEEHARTAARKYAKIIQKLDFPATFKDFKI
QNIVGSCDVKFPIRLEGLNYSHGMFSSYEPELFPGLIYRMKEPKVVLLIFVSGKVVLTGG
KKREDIYEAFESIYPVLQEFRKGEAVPSAPALPSTAPARALPAAPGSTVQLGLPAPQLQL
AGPST
NT seq 738 nt   +upstreamnt  +downstreamnt
atggctgcgggtcctagctcggggccagtgcctacacaagagctggcaatagaccgctct
gtgcaccgctcgggcattgtgccaacgctgcagaatatcgtagcaacagtcaacctggat
tgcaagctggacttgaaaaccattgcacagaaggcacgaaatgctgagtacaatccaaag
aggtttgcagcggtgatcatgcgaatacgagatccaaagaccactgccttagtgtttgct
tctggcaaaatggtctgcactggtgcaaagagtgaggagcacgcaaggactgctgcaagg
aagtatgctaaaatcatccagaagctggacttccctgccacgttcaaggacttcaagatc
cagaacatcgtgggatcctgcgatgtgaagttccccattcgactggagggcctgaattac
agccatggaatgttctccagctacgagccagagctgtttccaggtctgatctacagaatg
aaggagcccaaggtggtgctgctcatctttgtgtcgggcaaggttgtgctgacaggtggc
aagaagcgggaggacatctatgaggcattcgagtccatctatccagtgctgcaggagttc
aggaagggggaagcggtgccaagcgcaccggccctgccctccacggcccctgcccgagcc
ctacctgctgctcccggaagcactgtacagctgggactgccagcacctcagctgcagctg
gctgggccatcaacatga

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