KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_57105
Entry
COCSUDRAFT_57105  CDS       T02914                                 
Name
(RefSeq) hypothetical protein
  KO
K10597  ubiquitin conjugation factor E4 B [EC:2.3.2.27]
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl04120  Ubiquitin mediated proteolysis
csl04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    COCSUDRAFT_57105
   04120 Ubiquitin mediated proteolysis
    COCSUDRAFT_57105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csl04121]
    COCSUDRAFT_57105
Enzymes [BR:csl01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     COCSUDRAFT_57105
Ubiquitin system [BR:csl04121]
 Ubiquitin ligases (E3)
  U-box type E3
   COCSUDRAFT_57105
SSDB
Motif
Pfam: Ufd2P_core U-box HMG_box
Other DBs
NCBI-GeneID: 17039175
NCBI-ProteinID: XP_005645737
JGI: 57105
UniProt: I0YS24
LinkDB
AA seq 964 aa
MALQELAEEGGLPQVQLRLDRDNLERVLMARLMEEPAEAQWPLHYLLACYGRASDEFRAS
ASIKDAAAVQRVQESLLYSKQLVVSYSGLLLTMDMFPQPAVAQQRGALQLLDSLDRREGA
GPPTATPMPAGFLEDFAQRFEQEGLETIIEPIATEVSRRLVGMSPLGDYGAPLAMLQGLT
AIRPIARAYQKLPRWRPAVANGRQLQTESLLGPPFSLGVMPDVLSQPQPSVHQQCYAGLS
KQNPMEVNRIHHMLRAIMKTIHDTLYAISMNFLKSQDTREGMLSWFALALECNAERAKLQ
TNPRLAANHSFFVSLVTVLLRLCDPFLEPLSGKAWGKIDAGYVMRSKRIDYKDDTKLAVD
AEEQRAVQERLSSGDAASTPSYHFICECFFLTAKGLHLGLIKMIQDLYNLARTQQGLERD
LRHMDSMVQGMLEQNNPMVDHYQRQITMVKARIEQMGDMYIGYTAAISSDDLLKNSVLFY
RLVAAWMLRMASPATATTGQPELPLPSPAPLEFRMLPEYFVEDMVELLLYVSRFKPMVLE
GLPMEELLLFFVTFMGSPDFIHNPYLRSRMVEVLTTWMPQEEDGGASWKSRRSTQVAASV
LLLIDSHPLVLSNMVRSVLRLYVDIEHTSRNNAFYEKYNLRYSMGELLLHLWNIPAHREA
WRRVAQQEGGYGQLYQHFAHFLETDAIYLLNDAMEILPKVKETEIMMEDEERWKALPEEE
RQEQEQTLNQNTNQLRSDLLMAGRNLSIIRSSTTEVTAPWLLREMAPRIASTLNYFLLHL
AGSGRRKLKIKDPQRYSWQPKEVLAQIAAIYVHLSRADDNAVFAREIANDERSYNSSMFA
EASQVLRQFMLLSEGEIRELESLAARVVSAEAEKVAEEELLQDPPEEFVDALMDTLMEDP
VTLPTSKQVIDRSTISRHLLSDSHDPFNRMPLKEEDLIPNTELKARIQAWKAEMHEQARR
KMQS
NT seq 2895 nt   +upstreamnt  +downstreamnt
atggcgctgcaggagcttgcagaagagggggggcttccacaggtgcagctgcgcttggac
agggataaccttgagagggtcctcatggcacgattaatggaggaaccagccgaggcgcag
tggccgctgcactacctgctggcctgctatggcagagcctctgatgagttccgggcttct
gccagcatcaaggatgcagccgctgtgcagcgagtgcaggaatcgctgctgtacagcaag
cagctcgttgtctcctactctggcctgctcctcaccatggacatgttcccacagccagca
gtggcgcagcagaggggggcgctgcagcttctggacagcctggacaggagggagggtgct
gggccgcccacagccacgcccatgccagcgggcttcctggaagactttgcccagcgcttt
gagcaggaagggctggaaacaatcattgagcccattgcgacggaggtgtcgaggaggctg
gttgggatgtctcctttgggggactatggagcgcccctcgcaatgcttcagggcctcaca
gcgatcaggcccatcgcgcgcgcataccagaagctgccacggtggcggccagctgtcgca
aatgggcgccagctgcagacggagagcttgctggggccgccgttctctctgggggtgatg
ccggacgtgctgtcccagccgcagccgagcgtgcaccagcagtgctacgcggggctgtcc
aagcagaaccccatggaggtcaacaggatccaccacatgctgcgcgccatcatgaagacc
atccacgacaccctctacgccatctccatgaactttctcaagagccaggatacaagggag
ggcatgttgagctggtttgcgctggcgctggagtgtaatgcggagcgcgccaagctgcag
acaaatccgcgcctggccgcaaaccactccttcttcgtcagcctggtcacggtgctcctg
cgcctgtgcgaccccttcctagagcccctctccggcaaagcctggggcaagatagacgcc
gggtacgtgatgcgcagcaagcggatagactacaaggacgacaccaagctggcagtggat
gcagaggagcagagggcggtgcaggaacgcctcagctcaggcgacgcagccagcactccc
tcctaccacttcatctgcgagtgcttcttcctcaccgccaagggcctccacctgggcctc
atcaagatgatccaagacctctacaacctggcccggacgcagcaggggttggagcgggac
ctgcggcacatggattcgatggtgcagggcatgctggagcagaacaaccccatggtggac
cactaccagcgccagatcaccatggtcaaggcgcgcatcgagcagatgggcgacatgtac
atcggctacaccgccgccatctccagtgacgacttgctgaagaactcggtgctgttctat
cggctggtggctgcctggatgctgcgcatggcgtcccccgccaccgccaccactggccag
cccgaactgccgctgccctccccagcacccctggagttccgcatgctcccggagtacttt
gtggaggacatggttgagctgctgctgtatgtgagccgcttcaagcccatggtgctggag
gggctgcccatggaggagctgcttctcttctttgtcaccttcatgggctccccagacttt
atccacaacccctacctgcgctcccgcatggtcgaggtgctgacgacgtggatgccgcaa
gaggaggatggcggcgcgtcgtggaagagccggcgcagcacgcaggtggccgcctccgtg
ctcctgctcatcgacagccacccgctcgtcctcagcaacatggtcaggagtgtgctgcgg
ctgtatgtggacatcgagcacacctcgcgcaacaacgccttctacgaaaagtacaacctg
cgatacagcatgggagagctccttttgcacctgtggaacatccctgcgcatagggaggcg
tggaggagggtggcccagcaggagggcggctacgggcagctctaccagcactttgcacat
ttcctggagaccgacgccatctacctcctcaacgacgccatggaaatcctgcccaaagtg
aaggagacggagataatgatggaggatgaggagaggtggaaggcgctgcccgaggaggag
cgccaggagcaggaacagaccctcaaccagaacacaaaccagctgcgcagcgatctgctg
atggcggggcgcaacttgagcatcatccgcagctccacgaccgaggtcaccgcgccctgg
ttgctgcgcgagatggctccccgcattgcctccaccctcaactacttcttacttcacttg
gcagggtcggggcggcggaagctgaaaatcaaggacccgcagcgctacagctggcagccc
aaagaggtgctcgcgcagatcgcggccatctacgtgcacctctcgcgcgccgatgacaac
gctgtcttcgcgcgcgagatcgccaacgacgagcgctcctacaactccagcatgttcgcc
gaggcctcacaggtgctgcggcagttcatgctgctgtcggagggggaaatacgcgagctg
gagtccctggcggcacgcgtggtttcggctgaggccgagaaggtggccgaggaggaactg
ttgcaggatccgccggaggagtttgtggatgcactgatggacacgctgatggaagatccg
gtcaccctgcccaccagcaaacaggtcatcgaccgctccaccatctccaggcacctgctg
tcggactcgcatgaccccttcaacaggatgcccctgaaagaggaggacctcatacccaac
acagagctcaaagcgaggatccaggcgtggaaggccgagatgcacgagcaggctcgcaga
aaaatgcaatcctga

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