KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_60646
Entry
COCSUDRAFT_60646  CDS       T02914                                 
Name
(RefSeq) hypothetical protein
  KO
K03512  DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03410  Base excision repair
csl03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    COCSUDRAFT_60646
   03450 Non-homologous end-joining
    COCSUDRAFT_60646
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csl03400]
    COCSUDRAFT_60646
Enzymes [BR:csl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     COCSUDRAFT_60646
DNA repair and recombination proteins [BR:csl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     COCSUDRAFT_60646
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     COCSUDRAFT_60646
SSDB
Motif
Pfam: DNA_pol_lambd_f DNA_pol_B_palm DNA_pol_B_thumb NIP_1
Other DBs
NCBI-GeneID: 17035968
NCBI-ProteinID: XP_005642564
JGI: 60646
UniProt: I0YI01
LinkDB
AA seq 702 aa
MQVSYDGGKLLRLPKEVHFVTPEFVSECLAHGQLQPEREFLIDIVRMAVLATGQQAARNS
DSRHGGDLREPSRVHAEHHGGGEMSQDVWEQWQRAGFVPAPAATLNSKHGSKTRDAAPTS
YPTSKDVDVTERDQGASDVSKPSLNSKVIAESPGGLVPHMDTSSTVTERGSCGVWDVAYD
KSAAEETVRKLGLHWHRQEVESVKHAAADGSGDRSSGPGTTVNGGIPGHNGSQELASFAL
NNSCAHTACSAKAIQRAIKAVVESTSALVTADDCEKLGIGEKSIEKLQEIFMEVWGTGEA
TAERWYRDGCRSLEDVQGRSDLSMQQRTGMKYFEDFKQRIPRSEVAAMGATVCDAAEEVL
DCSNLPDGDLLFCSVLGSYTRGKPLTGDVDMLIAPPPSCGEIDSRQALHAICKCLQKRGL
LLDDMASTAPAARGDGAATFMGVARHATSPCARRVDIKFYPRRVLPFAIMHFTGSGAFSR
ALRYWARSRANEARRFQPSANGFKLSDYALVPIQSKEPTRQASNYHNAENVAEARKFKDF
WRANLGHAAAAVTSFVNVNVINVSGMAECLRLLESLRGSEHPYEDMAHLISEQLRADVYV
ARVEVERLFTAERYRLHAATRREPFAPQQLQQRQHSQEQRTAGAQRSTREQKNYRPQDYP
PPDYRPQDYPPPDYRPLDYRPLSVAGDHTLRIQLDPADRARP
NT seq 2109 nt   +upstreamnt  +downstreamnt
atgcaggtatcatatgacggcggcaagcttttgaggctgccaaaggaggttcattttgtc
acgccagaatttgtgagcgaatgcctcgcgcatggtcaactgcagcccgagagggagttt
ttgatagacatagtgcgcatggctgttctggccactggacaacaggctgcgcgcaacagc
gacagcaggcatggaggggatctgagggagcccagccgggtacatgcggaacatcatggc
ggtggcgaaatgtcgcaggatgtgtgggagcagtggcagagggctgggtttgtgcctgca
cctgcagcgaccctgaatagcaagcatggcagcaagacacgtgatgctgccccgaccagt
tatcctacaagcaaagatgtggatgtcacagagagagatcagggggcatctgacgtcagc
aagccctccttgaacagcaaggtcatcgcagagtctcctggtggactggtgccccatatg
gacacttcctccacagtcacagagcggggatcatgtggagtgtgggatgtggcctatgac
aagagtgcagcagaggagactgtcaggaagctgggcctgcactggcaccgacaggaggtg
gaaagtgtcaagcatgctgcagctgacggcagtggggaccgctcttcaggacctgggact
actgtgaacggtgggattccagggcataatggaagccaggaattggcatcctttgcgctg
aacaattcctgtgcccacacggcatgctcggcaaaggccattcagcgcgcaatcaaggca
gtggtggagtcgaccagtgctctggtgacagcagatgactgtgagaagctaggcatcgga
gagaagtccatcgagaaactgcaggaaattttcatggaggtgtggggcactggtgaagcc
actgcagagcgctggtaccgggatggctgccgctcactggaggatgtgcaaggccgctct
gacttgagcatgcagcagaggacgggcatgaagtactttgaggacttcaagcagcgcatc
cctcggtccgaggttgctgccatgggcgccaccgtgtgcgatgcggctgaggaagtgctt
gactgttccaatttgccagatggcgacctgctgttctgcagcgttttgggaagctacacg
cgaggcaagccgttgacaggcgatgtggacatgctcattgcacctcctcctagctgcggc
gagattgacagcaggcaggcactgcatgccatctgcaagtgtctccagaagcggggcctc
ctcctggacgacatggcaagcactgcccctgctgccaggggggatggtgccgctaccttc
atgggtgtggctcgccacgcaacatccccctgcgcccggcgcgtggacatcaaattctat
ccccgcagggtcctgccctttgccattatgcacttcacaggcagcggcgccttctcaaga
gcgctgcgatactgggcacggtcgcgcgccaatgaggcacgaaggtttcagccgagtgcg
aatggcttcaagctaagcgactacgcattagtgcccatccaaagcaaggagcctacccgg
caggcgtccaattaccacaatgctgaaaatgtggcggaggcaagaaagttcaaggatttc
tggagggcgaacctggggcacgcagcagcggccgtgacatctttcgtgaacgtgaacgtc
atcaacgtgtccgggatggcagagtgtctgcggcttttggagagcctgcgtggcagcgag
cacccgtacgaagacatggcgcacctgatcagcgagcagctgcgcgccgatgtgtacgtg
gcgcgcgtggaggttgagcggctgttcacagccgagcgctaccggctgcacgcagccact
aggagggagcctttcgcccctcagcagctgcagcagaggcagcacagtcaggagcagcgc
acagcaggagctcagcggagcacaagggagcagaagaactaccggccgcaagactacccg
ccgccagactaccgcccgcaagactacccgccgccagactaccggccgctagactaccgg
ccgctctccgtagcaggggatcataccctacggatccagctagaccctgcggatcgcgct
agaccctag

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