Cyanobacterium stanieri: Cyast_0289
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Entry
Cyast_0289 CDS
T02377
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
csn
Cyanobacterium stanieri
Pathway
csn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cyast_0289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csn03019
]
Cyast_0289
03016 Transfer RNA biogenesis [BR:
csn03016
]
Cyast_0289
Enzymes [BR:
csn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Cyast_0289
Messenger RNA biogenesis [BR:
csn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Cyast_0289
Transfer RNA biogenesis [BR:
csn03016
]
Prokaryotic type
tRNA degradation factors
Cyast_0289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
KhpA-B_KH
EXOSC1
SLS1_KH2
Motif
Other DBs
NCBI-ProteinID:
AFZ46269
UniProt:
K9YHF7
LinkDB
All DBs
Position
314958..317120
Genome browser
AA seq
720 aa
AA seq
DB search
MEEYDKSISFFEGRDIKIKVGLLAPQAGGSVLIEAGETSVFVTATRSQGREGIDFLPLTV
DYEERLYAAGRIPGGFLRREGRPPEKATLTSRLIDRPMRPLFPSWLRDDLQIVATTLSMD
EDVPPDVLAVTGASIATLVAQIPFAGPMAAVRVGLVKDEFIINPTFEEIDNGDLDLVVAG
TPDGVVMVEAGANQLPEQDIIEAIEFGYEAILELIQAQKDLIQELGIELVVEPKPDTDSS
ADLEKLIADKSTDEIKKVLSNFDLDKKGRDEALDAIKADIVEEAIASLPEDDPIKVATVE
NPKLLGNLFKQLTKKLMRLQIIEDGVRVDGRKLDQVRPISSRVRLLPPRVHGSGLFQRGL
TQVLSIATLGTPGDAQDLADDLHPDVEKRYLHHYNFPPYSVGETKPLRSPGRREIGHGAL
AERAIVPVLPPKEEFPYVIRVVSEVLSSNGSTSMGSVCGSTLALMDAGVPLIKPVSGAAM
GLIKEGDEVRILTDIQGIEDFLGDMDFKVAGTDEGITALQMDMKITGLELETIANAIKQA
KTARLHILQEMLKPISEPRKELSPFAPRLMTMKIDPEMIGLVIGPGGKTIKSITEQTGSK
IDISDDGTVTICAVQAERASQAKRIIQTMTRKLNEGDVYLGKVTRLIDIGAFVEVLPGKE
GMIHISQLAEHRVGKVEDEVAVGDEIVVKIRGFDNRGRLNLTRLGIHPEQAAIARQEAEA
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatatgataagtcaatatctttttttgaaggaagagatataaaaataaaagta
ggattgttagcacctcaagcaggaggttcagtattaatcgaagcaggagaaacatctgtt
tttgtaaccgccactcgttctcaaggcagagagggcatcgactttttacctttaaccgtt
gattatgaggagagattatatgccgcaggacgtatcccagggggatttttgcgccgtgaa
ggaagaccaccagaaaaagcgactcttaccagtcgtttaatagatcgccccatgcgtcct
ctttttccttcttggttaagagatgacttacaaattgtcgctaccaccctatccatggat
gaagatgtcccccccgacgttttggcggtgacgggtgcatctattgccacccttgtggca
caaattccttttgccgggcctatggcggcggtaagggtggggttagttaaggatgagttt
atcatcaatcccacctttgaggaaatcgataacggtgacttggatcttgtggtggcaggt
actcctgacggggtggtaatggtggaagctggggcaaaccaactgcccgaacaggacatt
atcgaagccattgagttcggttatgaggctattttagaattaatccaagcccaaaaagat
ctcatccaagagttgggtatcgagttggtggttgaacctaagcctgatactgattctagt
gctgatttagaaaaactcatcgccgataaaagtaccgatgaaatcaaaaaggttctttct
aattttgatttagataaaaaaggtagggatgaagccctagatgctatcaaagctgatatt
gtggaagaggcgatcgcatctttaccagaagacgatcccatcaaggtggcaacggtggaa
aatcctaaattattgggcaatcttttcaaacagttgaccaaaaaattgatgcgtctgcaa
atcatcgaggatggcgtaagggttgatggtcgtaaactcgatcaagtgcgccccatttcc
tcccgagtgcgtcttttaccccctagggttcacggtagtggtcttttccaaagaggttta
acccaagtcctctccattgctaccctcggcacccctggagatgctcaagatttggcggat
gatcttcatcctgatgtggaaaaacgttacctccaccattacaacttccccccctactcc
gtgggtgaaactaagccgttgcgatcgcccggtcgtcgggaaattggtcacggtgcctta
gctgaaagggcgatcgttcctgtactaccccccaaggaggaatttccctatgtcattcgg
gtggtgtctgaggtgctatcgtccaacggctctacttccatggggtctgtgtgtggctct
acccttgctctcatggatgcaggagtacccctcattaaacccgtcagtggtgccgccatg
ggcttaattaaagagggtgatgaggtgcgtattcttaccgacatccaaggtattgaagat
ttcctcggcgatatggattttaaagtagcaggtaccgatgaaggtatcaccgccctacag
atggatatgaaaatcactggtttggaactagaaaccattgccaacgccatcaaacaagca
aaaaccgcccgtttgcatatccttcaggaaatgcttaaacccatcagtgaacctcgcaag
gagttatcaccttttgctcctcgtttgatgaccatgaaaattgatcctgaaatgattggt
ttagtgattgggcctgggggtaaaaccatcaagagtatcaccgaacaaacaggctctaaa
attgatattagcgatgatggtaccgttaccatttgcgctgtacaagccgaaagagctagt
caagccaagcgtatcatccaaaccatgacccgtaaattaaatgagggtgatgtgtatttg
ggtaaagtaacccgtctgattgacatcggcgcctttgtggaagttttaccgggcaaagag
ggtatgatccatatttctcaattggcagaacaccgtgtgggcaaagtggaagatgaagtg
gcagtgggtgatgaaattgtggttaaaatccgtggttttgataaccgtggacgtttaaat
ctcacccgtttaggtattcatcccgaacaagctgcgatcgcccgtcaagaagcagaggcc
taa
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