Cyanobacterium stanieri: Cyast_0625
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Entry
Cyast_0625 CDS
T02377
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
csn
Cyanobacterium stanieri
Pathway
csn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Cyast_0625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csn03021
]
Cyast_0625
03400 DNA repair and recombination proteins [BR:
csn03400
]
Cyast_0625
Enzymes [BR:
csn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Cyast_0625
Transcription machinery [BR:
csn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Cyast_0625
DNA repair and recombination proteins [BR:
csn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Cyast_0625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_4
Biotin_lipoyl_2
RNA_pol_Rpb1_3
Motif
Other DBs
NCBI-ProteinID:
AFZ46601
UniProt:
K9YI03
LinkDB
All DBs
Position
complement(709611..713468)
Genome browser
AA seq
1285 aa
AA seq
DB search
MSQNKEQSKKPQVFYNRIIDKGALKKLIAKTFTEYGSARCAAVCDRLKTMGFHYATQAAV
SISVEDLKVPEAKKNMLAEAESTIRTTMNRYANGEITEVERFQKVIDTWNDTSESLKDEV
VRNFRQSDPLNSVYMMAFSGARGNISQVRQLVGMRGLMADPQGEIIDLPIKTNFREGLTV
TEYIISSYGARKGLVDTALRTADSGYLTRRLVDVSQDVIIRETDCGTTKGVWIEPMKDGD
RTLIPLGDRLLGRVLADDVVHPITNEVIAQRNQAIDADLAKLIGKTVEKVKVRSPLTCET
ARSVCQKCYGWSLAHGEWVNMGEAIGIIAAQSIGEPGTQLTMRTFHTGGVFTGEVAQRIT
SPVAGKVKFDKKLKVRENRTRHGDQKLLVEVNGNIIVGDKKVPVPVNSLLAIREGDEVIK
DQLLAEVMPQKTRSTERVTKDVASDLAGEVIFQDVDPLTTTDRQGNNTITASRNGLIWVL
SGQVYNLPPNAEPVVKNGEKIKQGSVLAETKLKTKSGGVCRFEEGSREIEIITASVSLDQ
ADIFLEHHGNQQQYVIHTPRGDRFALKVSPGTKVQNNQIVAELIDDTFTTETGGIMRYAG
LETGRGNKKQGYEVTTEGTLIWIPEESHEINKDISLLMVEDGQYVEAGTEVVKDVFCQSS
GIVEVIQKNDILREIIIKPGKLYMDLDPEQMATMEDGTILSPGTELMAGVTVEDECITEF
VDTNEGVGLLLRPMKQYEVVNTTQSPSQESLNSAGGKINLRPVLRTFFKDGERVKSVEGV
QLVTTQLVLETTEGMSADIELIEDENQTDCFRLQIVVLESVMLRRELETEPNIITTVTVT
DGQEIMPGDVVATTQILCQENGIIRGIREGVEAIRRILVVRENDIMEIEAEGKLLKQEGD
FVTQGELLAEGVKAPDSGYVMTTEGNTISLRHARPYRVSTGAILHIEQGDLVQRGDNLVL
LVFERAKTGDIVQGLPRIEELLEARKPKEPAILARRPGVCQVEYKDDEAIDVKVIEDDGT
ISEYSLSPNQNIIVGDNQRVNTGDPLSDGLVSPHELLEVFYDYYKEHMGAYDAALGAMQK
AQLFLVNQIQGVYQSQGIDISDKHIEVIVRQMTSKVHIDDGGDSIRLPGELVELRDIEKD
NETLSLTGGAPIEYTPKLMGITKSSLNTDSFISAASFQETTRVLTEAAIEGKSDWLRGLK
ENVIIGRLIPAGTGFNAYDENLDWEDTEVGAGNSDYIGDVSAEYEEQNYILPDSEDAIID
DQIARVLSPEDATINDDLIDDNYQS
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaaataaagaacaaagcaaaaaaccccaagttttctataacagaattattgat
aaaggggctttaaaaaaactgattgccaaaacttttacggaatacggctctgcccgttgt
gcggcagtgtgcgatcgcctcaaaaccatgggtttccactatgctacccaagcggcggta
tccatcagtgtggaagatttgaaggtacctgaagccaaaaaaaatatgttggcggaggca
gaaagcaccatcagaaccactatgaaccgttatgccaatggggaaattactgaggtagaa
cgtttccagaaggtaattgatacttggaatgatacctccgaatccctcaaggatgaagtg
gtacgcaatttccgtcaatcagatcccctcaactctgtgtatatgatggcgttttctggg
gcgaggggtaacatcagccaagttcgtcagttagtgggtatgcggggtttgatggcagat
cctcaaggggaaatcatcgacttacccattaaaaccaatttccgtgagggtttgacggta
acagaatatattatttcatcttacggtgccagaaaaggtctggtagatacagcgttacgt
accgccgactcaggttatcttacccgtcgtttagtggatgtatctcaggatgtgattatc
cgtgaaaccgattgcggtaccaccaaaggggtatggattgaacccatgaaagatggcgat
cgcaccttaattcctttaggagatcgtcttttaggtcgtgtcttagccgatgatgtggtt
caccccatcactaacgaagtcattgcccaacgcaatcaagccattgatgctgatttagcg
aaattaatcggtaaaactgttgaaaaagtaaaagtaagatctcccctcacctgtgaaacc
gcccgttctgtatgtcagaagtgttacggttggtccctcgcccatggagaatgggtaaat
atgggtgaagctatcggtattatcgccgcccagtccatcggtgaaccgggtactcagctt
accatgcgtaccttccacactgggggggtatttactggggaagtcgcccaacgtatcacc
agcccagtggcaggaaaggtgaagtttgataaaaaattaaaggtcagggaaaaccgtacc
cgccatggtgatcaaaaactattggtggaggttaacggtaatatcatcgttggtgataaa
aaagttcctgtacccgtcaacagtttactcgccatccgtgaaggagacgaagtaatcaaa
gatcaactcttggcagaagtaatgccccaaaaaactcgctccaccgaaagagtgaccaag
gatgtggcatctgacttggctggagaagttattttccaagacgtagatcccctcaccacc
accgacagacagggcaacaacaccatcacagcctcccgtaacggcttaatttgggtactt
tctggacaggtgtataaccttccccccaatgccgaacctgtggtcaaaaacggtgaaaaa
attaaacaaggttctgtattggcagaaaccaagctcaaaaccaagagtggcggtgtttgt
cgttttgaagaaggcagtcgagaaattgaaattatcaccgcttccgtatccttggatcaa
gcagatattttcctcgaacaccatggcaatcaacaacagtatgttattcatacccctagg
ggcgatcgttttgccctcaaagtaagccccggtaccaaggtacaaaacaatcaaatcgtt
gccgaactcattgacgataccttcaccaccgaaacaggcggtatcatgcgctatgcaggg
ttagaaactggacggggtaacaaaaaacaaggctacgaagtaaccaccgaaggaaccttg
atctggattcctgaagaaagccacgaaatcaataaagacatctccctcttgatggtggaa
gatggtcaatatgtggaagcaggtaccgaagtagttaaagatgtattctgtcaatctagc
ggtattgtcgaagtaattcagaagaacgacatcctcagagaaatcatcatcaaacctggt
aagctatacatggacttagatccagaacagatggcaaccatggaagacggcaccattctt
tcccccggcaccgaattaatggcaggggtaaccgtagaggatgaatgtatcaccgaattt
gtggatactaacgaaggggttggtttattactccgtcccatgaaacaatatgaggtggtc
aataccacccagtctccttcccaagaatccttgaacagtgctggaggtaaaattaacctt
cgtcctgtgttacgtaccttcttcaaagatggtgaaagggtcaagagtgtggaaggggta
caattagttactacccaacttgtcctcgaaaccaccgagggtatgagtgcggacatcgag
ttaatcgaagacgaaaatcaaactgattgtttccgtttacaaatcgtcgtcctcgagtcg
gtgatgttacgtcgtgaattggaaacagaacctaatattatcaccaccgtaactgttacc
gatggacaggaaattatgccgggggatgtggtcgccaccactcagattctttgtcaagaa
aacggtattatccgaggtatccgtgaaggagtcgaggcgattcgccgtattttggtggtc
agggaaaatgacatcatggaaattgaggcggagggtaaattactcaaacaagaaggggat
tttgtcacccaaggggaattattagccgagggagtaaaagcccctgattctggctatgtg
atgaccaccgaaggtaataccatcagcctacgccatgcccgtccttaccgtgtatctacg
ggggcaattttacatatcgaacagggtgatctggttcaacggggtgataaccttgtatta
cttgtatttgaacgggctaaaactggggatattgttcagggtttaccgagaattgaggaa
ttattggaagctcgtaaacccaaggaacctgccattcttgcccgtcgtcctggggtgtgt
caggtagagtataaagatgacgaggcgatcgatgttaaagttatcgaagatgatggcact
atctctgaatactctttgagtcctaaccaaaatattattgtgggtgataatcaaagggtt
aatacgggtgatcctttatctgatggtttagttagtcctcacgaactgttagaggtgttc
tacgactactataaagaacacatgggcgcctatgatgctgctttgggcgcaatgcaaaaa
gctcaactattcttggttaatcagattcaaggggtttaccaatctcaagggattgatatt
tccgataaacatatcgaggtgattgtacgtcagatgacttctaaggtacacattgacgat
ggtggcgatagtattcgtttaccgggagaattggtagagttgcgcgacattgaaaaagat
aatgaaactttatccttaactggtggtgctcctatcgaatatactcctaagttgatgggt
attactaaatctagtttgaatactgatagtttcatctcggcggctagtttccaagaaact
acaagggtactgactgaggcggccatcgaaggtaagtctgactggttaagaggtttgaaa
gaaaacgtaattatcggacgtttgattcctgctggtacgggattcaacgcctatgacgaa
aacctcgattgggaagatacggaggtaggcgctggtaattctgattatattggtgatgtg
agtgccgaatatgaggagcaaaattatattttgcctgattcggaagatgccattattgat
gatcaaattgctcgggtgttatctcctgaagatgccactattaacgatgatttgattgat
gataattatcaaagttaa
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integrated database retrieval system
