Cyanobacterium stanieri: Cyast_1265
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Entry
Cyast_1265 CDS
T02377
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
csn
Cyanobacterium stanieri
Brite
KEGG Orthology (KO) [BR:
csn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csn03032
]
Cyast_1265
03400 DNA repair and recombination proteins [BR:
csn03400
]
Cyast_1265
Enzymes [BR:
csn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Cyast_1265
DNA replication proteins [BR:
csn03032
]
Prokaryotic type
DNA Topoisomerases
Cyast_1265
DNA repair and recombination proteins [BR:
csn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Cyast_1265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
DUF6429
Motif
Other DBs
NCBI-ProteinID:
AFZ47230
UniProt:
K9YLF5
LinkDB
All DBs
Position
1390929..1393568
Genome browser
AA seq
879 aa
AA seq
DB search
MSTLVIVESPTKAKTIRNYLPKDFIVEASMGHIRDLPSSAEEIPAQYKQFDWARLGVNVE
NDFEPIYVIPKGKNKKVQELKKLLNGADELILATDEDREGESISWHLLQLLKPKVPIKRM
VFHEITKEAIQKALSNCRDIDENLVHAQETRRILDRLVGYTLSPLLWKKIARGLSAGRVQ
SVAVRLLVQRERLRRAFNSASYWDLKALLNHDKIDFEAKLSTLAGQKLATGSDFDPDTGK
LIKGKKVTVLDEQGAIALKDRLDGKPWTVTDTEEKPTTRKPYAPFTTSTLQQEANRKLGL
GARDTMRIAQSLYENGYITYMRTDSVHLSDQAIAAARACVEQMYGKEYLSPKPRQYKTKA
KGAQEAHEAIRPAGNTFRIPKETGLKDRELALYDLIWKRTVASQMAEARLTQIAVNIQVE
DAVFRSSGKRIDFPGFFRAYVEGSDDPEAALENQEVILPNLTQGDRPRCKELDVVNHQTQ
PPARYTEASLVKTLETEGVGRPSTYASIISTIIDRGYAQLRSKALIPTFTAFAVVSLLEQ
NFEELVDTKFTSKMEQSLDEIAAGQEQWIPYLKNFYLGDQGLQNQVKTRETEIDPSQAKA
IALENLDVQVKIGRFGAYLEAQRGEDLVKSSIPEELTPSDLNPEQVEMLLKQKIEGPKVL
GHHPESEKPIYLLIGSYGPYVQLGDTPEGKAKKPKTASFPKGTQLEDIDLDMALAYLSLP
RTLGEHPDTGKPVKVSLGRFGPYVVHDQGKDGKDYRSLKKEDDLLTISFERALELLAQPK
RGRGRSAGSAKKPLRELGNHPDDDQPINIYDGPYGVYFKHGKTNVKLPDGETAESMSLDK
ALLLLKDKAPAKKKTTTRKRSTTTTKKKTTTRKKKTEDS
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacccttgtcatcgtcgagtcacccaccaaagcaaaaaccatccgtaactattta
cccaaggattttatagtcgaagcatccatggggcatatccgagatttaccctcctctgcc
gaggaaattcctgctcaatataaacagtttgattgggcaaggttgggggtaaatgtagaa
aatgattttgagcctatttatgtgattcccaaggggaaaaataagaaggtacaggagtta
aaaaaacttttgaatggtgcggatgagttgattctggcgacggatgaagacagggaaggg
gagagtataagttggcatttattacaattacttaagcctaaagtacctattaaacgcatg
gttttccatgagattacgaaggaagcgattcaaaaggcgttatctaattgtcgagatatt
gatgaaaatttggttcatgcccaagaaactcggcgtattctggatcgattggtgggttat
accctctctcctttgttgtggaaaaaaattgcccgtggtttgtcggcgggaagggtgcag
tcggtggcggtgcgtctcttggtgcaaagggaaagattgagaagggcttttaacagtgct
tcctattgggatcttaaggctttgttaaatcatgacaaaattgactttgaggctaaatta
agtaccttggcggggcaaaaactcgccacagggagcgattttgatcccgatacgggtaag
ttgatcaaggggaaaaaagtaacggttttggatgagcaaggggcgatcgcccttaaggac
agactagatggcaaaccttggacagttaccgataccgaggaaaaacctaccaccagaaaa
ccctacgccccttttaccacctccaccctgcaacaggaggctaaccgcaaattaggactg
ggggcaagggataccatgcgcatcgcccaaagcctatatgagaatggctacattacctat
atgcgtaccgattcggtacatctatcggatcaggcgatcgccgccgcccgtgcctgtgta
gaacaaatgtacgggaaagaatatttaagccccaaacctagacaatataaaaccaaagct
aagggagcgcaagaagcccacgaagccatccgcccagcgggtaataccttccgcatcccc
aaggaaacagggttaaaagatcgagaattagccctctacgacttgatttggaaacgtacc
gttgcctcccagatggcagaggccagattgacccaaatcgccgttaatattcaggtagaa
gatgctgtttttcgttcctcgggtaaaaggattgatttccccggtttctttcgtgcctat
gtggaaggttctgacgatcccgaagcggcgctcgaaaaccaagaggttatcctacctaac
ctcacccagggcgatcgcccccgatgcaaagaattagacgtagtcaatcaccaaacccaa
ccccctgcccgttatactgaggcatccctcgtaaaaaccctcgaaaccgaaggggtgggg
cgccctagtacctacgccagtattatcagcaccatcattgatcgaggttacgcccaactg
cgttccaaagccctcattcccacctttaccgcctttgccgtggttagtttactagaacaa
aacttcgaggaattggtggacaccaaattcacctcaaaaatggagcaaagccttgatgaa
attgccgcaggacaagagcagtggattccctacctcaaaaacttctatctaggagatcaa
ggactgcaaaaccaagttaaaacaagggaaacagagatcgatcctagtcaagcaaaggcg
atcgcccttgaaaacctcgatgtacaggtcaagataggacgttttggcgcttacttagaa
gcccaacggggagaagacttagtaaaatcttctatccccgaagaactaaccccctccgat
ctcaaccccgaacaggtagagatgttattaaaacaaaaaatcgaaggtcccaaagtcctc
ggacatcaccccgaatccgaaaaacccatctacctgcttataggcagttatggtccctat
gtacaactaggagacacccccgaaggcaaagccaaaaaaccgaaaaccgcatcttttccc
aaaggtacccagttagaagacatcgatcttgacatggcgttagcatacctttccctaccc
cgtactctcggcgaacatcccgacacaggaaaacccgtcaaagtgagcctaggacgtttt
ggcccttatgtagttcatgatcaaggaaaagacggtaaggattatcgttccctcaaaaaa
gaagacgatctcttaaccatctcctttgaaagagctttagaacttctcgcccaacccaaa
aggggcagggggcgcagtgcaggaagtgccaagaaacctttacgggaattgggcaatcat
cccgatgatgatcaacctatcaatatctatgatgggccttatggggtatatttcaaacac
ggtaaaaccaacgtcaagttacccgatggcgaaaccgccgagagtatgagcttagataag
gctttgttattgttaaaagataaagcccccgccaaaaagaaaaccaccactcgtaaaagg
tcgactactaccaccaaaaagaaaaccactactcgtaaaaagaaaacagaggacagttaa
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