Clostridium cf. saccharolyticum K10: CLS_01090
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Entry
CLS_01090 CDS
T02614
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
cso
Clostridium cf. saccharolyticum K10
Pathway
cso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CLS_01090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cso03400
]
CLS_01090
DNA repair and recombination proteins [BR:
cso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CLS_01090
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CLS_01090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
RecR_C
Toprim
RecR_ZnF
HHH
HHH_5
Prok-RING_4
HHH_8
IMS_HHH
YdjO
DZR
Motif
Other DBs
NCBI-ProteinID:
CBK75996
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Position
99823..100422
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AA seq
199 aa
AA seq
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MDYYSSQITKLIEELSKLPGIGSKSAQRLAFHIINMPAEQVERLSSAITDAKKNVRYCRE
CFTLTDKELCPICESARRDHGIIMVVENTRDLAAYEKTGKYEGVYHVLHGAISPMLGIGP
GDIKLKELMTRLQKEEVREVIIATNSSLEGETTAMYISKLIKPTGIKVTRIASGVPVGGD
LEYIDEVTLLRALEGRTEL
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggattactacagcagtcagataacaaaattgattgaggagctgtcaaagctgcccgga
atcggaagcaaatcagctcagcgcctggcctttcacatcataaacatgccggctgagcag
gttgaacgcctttcatcggctatcacggatgccaagaaaaatgtccgttactgccgggag
tgcttcactttgacagacaaggagctttgtcccatctgcgagagcgcaaggcgcgatcac
ggcatcatcatggtagtggagaatacgagggatttggccgcatatgagaagaccggaaag
tatgagggagtttaccacgttctgcacggcgctatatctccgatgctgggaatcggaccc
ggcgatattaagctgaaggagctgatgaccaggctgcagaaggaagaggtgagggaggta
atcattgccaccaactcaagccttgagggagagacgactgccatgtatatcagcaagctg
ataaagcctacggggatcaaggtgactaggattgccagcggtgttcccgtaggcggcgat
ctggagtatatcgacgaggtgactctgctcagggcgctggaaggcagaactgagctgtaa
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