Ceratosolen solmsi marchali (fig wasp): 105362561
Help
Entry
105362561 CDS
T06056
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K19719
collagen type II alpha
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105362561
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
csol00536
]
105362561
Glycosaminoglycan binding proteins [BR:
csol00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105362561
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
TILa
CFC
PSP94
Motif
Other DBs
NCBI-GeneID:
105362561
NCBI-ProteinID:
XP_011498323
LinkDB
All DBs
Position
Unknown
AA seq
928 aa
AA seq
DB search
MCKFNGTNYQSGDYWKLNNCSQCRCYLGQIFCSNSSGCSTVAPESVTYNGYNNTRNSVPV
DANEDEAERRKSMNVRVINVEDTSNIVPDISGYYSQLLEVGQASAEKGPTPVIYQEPYVQ
IGPQGPPGPAGSPGPMGFTGSRGEIGEPGSPGATGPPGPRGLPGLPGNDGEPGEDGEIGH
MGSQGLPGTRGPPGLSGLPGIKGHRGIPGADGLKGEVGAPGEKGAIGVPGATGLTGPAGP
SGSRGERGRDGPPGPPGVRGADGLTGSPGSPGLLGKSGPVGSPGPRGSKGDQGIQGLKGN
QGSQGPRGDIGRTGIPGEAGPPGVTGKEGPRGEKGVPGNTGSIGQSGFPGIRGLPGPIGN
AGPPGTEGLPGAPGEKGGRGDTGVKGEPGFPGSRGMPGPVGNEGKKGKRGPIGPVGPPGP
TGERGNTGPTGLHGADGAVGPKGQPGERGPIGPVGPKGAIGDSGRPGQPGPQGLRGSPGK
AGNPGKPGNNGDRGPAGSNGKPGEQGIQGPHGPVGPMGPPGEKGFPGESGEDGEQGIPGP
PGGDGQPGMRGKPGLPGPDGPKGERGPDGVSGPKGHRGFNGLQGRPGQPGIPGEKGAQGP
LGPSGKNGDIGVRGLPGRDGNPGLPGQAANPGPRGPPGEDGRHGPPGLPGPPGPPGTPGE
VNYGYDAASLAALFGQGQSKGPDSSSSIDQPPRLFSGPLNDEERKDMLTKVYDRVKISLQ
KLIKPTGEKNSPARTCSDLFATYPEKPSGDYWIDPNDGDFQDAILVHCDAEKRSTCIFAS
PARSPELNHLGKEQELWLNEIENAPKISYKADSNQIGYLQLLSKEAEQNVTYHCKNSIAY
YDSERKTYRKGLKFLTWNDVELLPRGSQRLRYEAIVDECKSREDNWGKTIITYKTDKPSR
LPILDIAMRDVGKPEQRFWIEIGLVCFR
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaagtttaacggaacgaattatcaatctggggactattggaaacttaataactgc
agccaatgcagatgttatcttgggcaaattttctgttctaacagttccggctgcagcacg
gttgcgccagagtccgtaacctataatggctataacaacacaagaaattcagtgccagtg
gacgcgaatgaagatgaagccgagcggagaaaatcaatgaacgtgcgagtgattaacgtg
gaagatacttcaaatatcgttccagacatctccggctactatagtcaattattagaagta
ggacaagcgagtgcagaaaaaggtccaactcctgtaatatatcaagagccttatgtgcaa
attggcccacaaggaccacccggccctgcgggttctcctggtccaatgggttttacggga
tcgaggggtgagattggcgagccaggatctccgggagcgacaggaccacctggacctcgt
ggtttaccgggtctacctgggaacgatggtgagcctggagaagatggcgaaattggtcat
atgggctctcagggcttaccgggtacgcgtggccctcctggtttatcaggtttgccaggt
ataaagggtcacagaggtataccgggagcggacggcttaaagggtgaggtcggtgctcct
ggtgaaaaaggagcgattggagtgcctggtgctacagggcttacagggcctgctggacct
tcaggctcgaggggtgaaagaggaagggatggaccacctggcccgcctggcgttagaggt
gcggatggattgaccggtagtcccggatcacccggattgttaggaaaatcaggtccggtt
ggatctccgggtcctcgaggttcaaaaggtgatcaaggtatacaaggactaaaaggaaat
caaggatcacaaggccctcgaggtgatatcggtcgaacgggtatacccggggaagctgga
ccaccaggagtgacagggaaggaaggtccacgaggagaaaagggtgtaccagggaacact
ggctcgattggacaatcaggattcccaggaatcagaggtcttccgggaccaattggcaat
gctgggccacctggaactgagggtttaccgggcgcaccaggggagaagggcggccgaggc
gacaccggggtcaagggcgaacctggtttcccaggatcacgcggtatgcccggcccagtt
ggtaacgagggtaagaagggtaagaggggcccgattggccctgttggaccacctggacct
actggcgagagaggcaatacgggtccaacgggtctccacggtgccgatggtgccgtcggt
ccaaaaggtcagcctggtgaacgagggccaattggtcccgtcgggccaaaaggagcgatt
ggtgattcaggacgaccgggtcaaccaggaccacagggattacggggatcgcccgggaaa
gctggaaaccctgggaaaccgggaaataatggagatcgaggaccagcaggctccaatggc
aaacctggagagcaaggtattcaaggaccacatggacctgtcggtccgatgggtcctcct
ggtgaaaagggatttcccggcgaatcaggagaggacggcgagcaaggcattccaggtcct
ccaggaggagacggacagcctggaatgagaggaaagccaggtttgccagggccggatggc
cctaagggcgaacgaggacctgacggtgtttcaggccctaagggtcatcgaggtttcaat
ggccttcaaggtagaccgggtcagccgggaatccccggtgaaaagggcgctcaagggccc
cttgggccctcgggaaagaatggtgatattggtgtgcgggggctaccgggtcgcgatggt
aatcctggcctaccaggccaagccgctaaccccgggccacgtggacctcctggcgaggat
ggcagacacggaccacctggactaccgggaccacccggaccacctggaacgccgggtgaa
gtcaactatgggtacgacgctgcgtctctcgctgctttattcggccaaggacaaagtaaa
ggacctgattcgtcgtcatccatagatcagcctccaaggcttttcagtggaccactcaat
gacgaagagcgcaaagatatgctaactaaagtctacgatcgagtgaaaatatctctgcaa
aagcttataaaaccgacaggggagaaaaattcaccagctagaacttgtagtgacctattt
gccacttatccggaaaagccaagcggagactattggattgatccaaatgacggcgatttt
caagacgctattttagttcattgtgatgcggaaaaacgttctacgtgtattttcgccagt
ccagccagaagtccagaactcaatcatctcggcaaagaacaagaactttggctaaacgaa
attgaaaatgcaccaaagattagctacaaagcagatagcaaccaaataggatacttacaa
ttattatcaaaagaagcggaacagaatgttacttaccattgtaaaaatagtattgcgtat
tacgatagcgaacgaaaaacttatagaaagggattgaagttcctgacatggaatgacgtt
gaattgctaccaagaggaagccagaggcttcggtatgaagcaattgtagacgaatgcaag
tcaagagaagataattggggaaaaactatcatcacgtacaagactgataaaccatcaaga
ctaccaatactagacattgctatgcgcgatgttggtaaacctgagcaacgcttttggata
gaaattggattagtttgcttccggtga
DBGET
integrated database retrieval system