Clostridium saccharoperbutylacetonicum: Cspa_c32280
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Entry
Cspa_c32280 CDS
T02467
Symbol
mutS3
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
csr
Clostridium saccharoperbutylacetonicum
Pathway
csr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Cspa_c32280 (mutS3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csr03400
]
Cspa_c32280 (mutS3)
DNA repair and recombination proteins [BR:
csr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Cspa_c32280 (mutS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
AAA_14
AAA_29
DASH_Ask1
AAA_22
ZapD
Motif
Other DBs
NCBI-ProteinID:
AGF56989
UniProt:
M1MGD9
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Position
3508769..3511507
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AA seq
912 aa
AA seq
DB search
MALTPMMVEYIKTKEEYKDCILFYRLGDFYEMFFEDAETVSRELELVLTGKNCGLEERAP
MCGIPHHAAAAYIPRLISKGYKVAICEQLEDPKEAKGIVKRGVVKIITPGTFIDNTTSLE
NDNTYLMAIQVYDDKIGISISDISTGEFKTTSFNNIRISLLDEIAKISPKEILVSETLSD
DVIQDIKGITSALISKVNFEEFLVSKEDLIEQFSDMEVAGLTVEREITSRVLLKYIYETQ
KMSLTNINLLEQYEIINYMTIDGNSRRNLELTESIREKNKKGSLLWVLDKSATAMGGRTL
RKWIDEPLIIKTEIEKRLNGVNEAFSSVSFNEDLRIALKEIYDIERIVGKISNKNVNAKD
MLSLKSSLEKLPMVKKLLEDRLSDLLKEYHAELDELTDIKDLLDLSIKEEPSLSIKEGNI
IKDGYNSEVDELRQSKLHGKEWIAALENREREFTGIKSLKVGYNKVFGYYIEISKSNYDS
IPEGRYVRKQTLSNAERYITEELKVMEEKILGAEEKLINLEYALFSDIRDNIEKEISRLK
KSARIISNLDGISTLALIALENDYIKPEINEDGIIDITDGRHPVVEKVIGRGEFVSNNTI
LNQNDKELLLITGPNMAGKSTYMRQVALITLMAQIGSFVPASKANISICDKIFTRIGASD
DLAGGKSTFMVEMWEVSNILRNATQKSLVLLDEVGRGTSTYDGLSIAWSVIEYITKNDKL
RCKTLFATHYHELVKLEGILPGVKNYSVAVKKMKDSVIFLRKIVEGGADESYGIEVAKLA
GLPEAVINRAKEILQNLEGENNFDIHKVTNTEHDEAEASIDINISNNTVSVEENTSEVLK
EEQSTIVEIKEEVKTKKHKEKDASNNMQLDFSFMEKEALLKEISQVDILSLNPMDAMNTL
YKLVSEAKKLTN
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggctttaacgccaatgatggttgaatacataaaaactaaagaggaatataaagattgt
attctattttatagattaggtgatttttatgaaatgttttttgaagatgctgaaactgta
tcgagagaattagaactagttcttacagggaaaaattgtggcttagaagaaagagctcca
atgtgtggaatacctcatcatgcagctgcggcatacattccaaggttaattagcaaaggc
tataaggttgcaatttgtgagcaacttgaagatccaaaggaagccaaaggaattgtaaaa
agaggagtagtaaaaataataactcctggaacttttattgataatacaacttcacttgaa
aatgataatacatatttgatggctattcaagtatacgatgataaaataggaatttcgatt
tctgatataagtactggtgaatttaaaacaacatcttttaacaatataagaataagctta
cttgatgaaatagcaaaaatttcaccaaaagaaatcttagtttcagaaactttaagtgat
gatgttattcaagatataaaaggaataacttcagcattaatttctaaagtgaattttgaa
gaatttttagtatcaaaagaagatttaatagaacaattttctgatatggaagtagctggt
ttgacagttgaaagagaaattacaagtagggttcttttaaagtatatatatgaaacacaa
aaaatgagtttaacaaatataaatttacttgaacaatatgaaataattaattacatgact
attgatggaaattcaagaagaaatcttgaattaactgaaagcattagagagaaaaataaa
aaaggttctttattatgggttttagataaaagtgctactgcaatgggtggaagaactcta
aggaagtggattgacgaaccactaattattaaaactgaaatagaaaaaaggctaaatggg
gtaaatgaagcttttagttctgtaagtttcaatgaagatttaagaattgcattaaaagaa
atttatgatattgaaagaattgttggtaagatttctaataaaaatgtaaatgcaaaagat
atgttatctcttaaatcatcattagaaaagcttcctatggttaaaaaacttctagaagat
agattatctgatcttctaaaagaatatcatgctgaacttgatgagttaactgatataaaa
gatttattagatttatccataaaagaggagccttcattaagcataaaagaaggtaatatt
attaaagatggctacaatagtgaagttgatgaattaagacaatcaaagcttcatggcaaa
gaatggattgctgctcttgaaaatcgtgaaagagaatttacaggaattaaatccttaaaa
gtaggttataacaaagtatttggttactatatagaaatttctaaatctaattatgattct
attcctgaaggtagatacgtgagaaagcagactctgtcaaacgctgagagatatataact
gaagagttaaaggtaatggaagaaaaaatcttaggagcagaagaaaagcttattaattta
gaatatgcactattctcagatataagagacaatatagaaaaagaaatttcaagacttaag
aaaagtgctaggataatttcaaacttagacggaatatccactttagctttaattgcccta
gaaaatgattatattaaaccagaaattaatgaagatgggattattgacataacagatgga
agacatccagtagttgaaaaagtaataggtagaggtgaatttgtttcaaataatactatt
ttgaatcaaaatgataaagaattacttttaataacaggtccaaatatggcaggtaaatca
acttatatgaggcaagttgctcttattactttaatggctcaaattgggtcttttgtacca
gcatcaaaagccaatatttctatatgtgataagattttcactagaattggtgcatctgat
gacctggctggtggtaaatcaacttttatggttgaaatgtgggaagtatcaaatatttta
agaaatgcaactcaaaaaagtttagtattattagatgaagttggtagaggtacttcaaca
tatgatggattatccatagcttggtcagttattgagtatataacaaaaaatgataagctt
agatgtaaaacattatttgctactcactaccatgaattagtaaaacttgaaggtatctta
cctggtgttaaaaattactctgttgctgttaaaaaaatgaaagacagcgtaatcttctta
agaaaaattgtagaaggcggcgctgatgaatcatatggaattgaggttgctaaacttgca
ggtcttccagaggcagtaattaatagagctaaagaaattcttcaaaatttagagggcgag
aataattttgatattcataaagtaacaaatacagaacatgatgaagctgaagcttctata
gatataaatatttctaataatactgtttcagttgaagaaaatacctctgaagttttaaaa
gaggagcagtctactatagtagaaattaaagaagaagttaaaactaagaaacacaaggaa
aaagatgcttcaaataatatgcagttagacttttcctttatggaaaaggaagctttatta
aaagaaataagtcaagttgatattttgagcttaaatcctatggatgccatgaacacacta
tataaattagtgagtgaagctaaaaagctaactaactag
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