Clostridium saccharoperbutylacetonicum: Cspa_c41820
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Entry
Cspa_c41820 CDS
T02467
Name
(GenBank) histidine kinase,HAMP domain-containing protein,histidine kinase
KO
K18345
two-component system, OmpR family, sensor histidine kinase VanS [EC:
2.7.13.3
]
Organism
csr
Clostridium saccharoperbutylacetonicum
Pathway
csr01502
Vancomycin resistance
csr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
csr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Cspa_c41820
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Cspa_c41820
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
csr01001
]
Cspa_c41820
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
csr02022
]
Cspa_c41820
01504 Antimicrobial resistance genes [BR:
csr01504
]
Cspa_c41820
Enzymes [BR:
csr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
Cspa_c41820
Protein kinases [BR:
csr01001
]
Histidine kinases
OmpR family
Cspa_c41820
Two-component system [BR:
csr02022
]
OmpR family
VanS-VanR (VanB type vancomycin resistance)
Cspa_c41820
Antimicrobial resistance genes [BR:
csr01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
Cspa_c41820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
HAMP
HATPase_c_5
DnaB_C
DUF5492
Motif
Other DBs
NCBI-ProteinID:
AGF57935
UniProt:
M1LXE8
LinkDB
All DBs
Position
4539920..4541434
Genome browser
AA seq
504 aa
AA seq
DB search
MKHSLSRRLFGITLSLVIALAVIAFFAQTLFFESFYLYKKTNSLALEVNKFNDLYSLHIE
TDKDLINALQKFESDNNAKIIIRSLDGKYRYISNNIASDKESYDTLTAFGAELINDEELV
NQVVTYSQTKYKIFENQSSGTKKIGIVSPISLNSKNDSIFFCISSIQPIKEASDVAREFL
IYLFLGLITISIILALIYSNLISKPLVNLTRVANKISNMDFSPVCETDREDEIGSLAKSL
NFLSKNLQAALLDLQQKNRKLEDDIEKERQLENMRKDFISNVSHELKTPIGIIEGYAEGL
KDGIASGEDATMYLETIIDESKKMSVLVTNMLELSKLESGTIKPNFEAFNINRLINKILK
KHKPDFEENKFNVNFNSTTPYSYVYADPFQMEQVLTNLITNAIKYTPPKNDINVSIQEGL
DKFKISVQNMGVSIPQEEIGKLFDKFYRLDKSRERTQKNSTGIGLSIVKNILRLHNSEFN
FQNINGGVEFYFYLEKIVSSEEEE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatagtttatcaagaagattatttggtataacattatctctggttattgcttta
gctgttattgctttttttgcacaaactcttttttttgaaagcttttatttatataagaag
acaaactcattagccctagaagtaaataaatttaatgatttatattctctccacattgag
actgataaggatttaattaatgcacttcaaaagttcgaaagtgataataatgcaaaaata
ataattcgttctcttgatggaaaatatagatatatttcaaataatattgctagtgataaa
gaaagttatgatacattaactgcatttggtgctgaattaattaatgatgaagagttagtt
aatcaagttgtaacttattcacaaacaaaatataaaatttttgaaaatcaaagcagtggt
acgaagaagattggaatagttagtccaatatctttaaatagtaaaaatgactctatcttc
ttttgtatttcatcaatacagccaataaaagaagcttctgatgttgctagagaattttta
atttatttatttttaggcttaattactatttcaataatattagctttaatttactcaaac
ttaatatctaaaccattagttaatttaactcgtgttgcaaataagatatctaatatggat
ttttctcctgtatgtgaaactgatagagaagatgaaatcggaagtcttgctaaatcttta
aactttctatctaaaaatcttcaagcagccttactggatttacagcaaaaaaataggaaa
ctagaagatgatattgaaaaagaaaggcaattggaaaatatgagaaaagattttatttct
aatgttagtcatgaactcaaaactccaattggaataattgaaggatatgctgaaggacta
aaagatggaattgcttccggtgaggatgctaccatgtatttggaaactataattgatgaa
tctaaaaaaatgagtgtattagttactaatatgttagaattatcaaagttagaatcagga
actattaaaccaaattttgaagcgtttaatataaatcgattaataaataagatattaaaa
aagcataaacctgactttgaagaaaataaatttaatgttaattttaattctacgactcca
tatagttatgtctatgctgacccatttcaaatggaacaagtattaaccaatttaataacc
aatgcaattaaatatacacctcctaaaaatgatattaatgtaagtattcaggaaggctta
gataaatttaaaatatcagttcaaaatatgggggtatctattcctcaagaagaaatagga
aaactttttgataaattctatcgtttggataaatctcgagaaagaactcaaaaaaatagc
actggtataggattatcaattgtaaaaaatattttacgccttcataacagcgaatttaat
tttcaaaatataaatggtggagtagaattctacttctatcttgaaaagatagtttcctct
gaagaagaggaataa
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