Acetoanaerobium sticklandii: CLOST_1407
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Entry
CLOST_1407 CDS
T01334
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cst
Acetoanaerobium sticklandii
Pathway
cst03030
DNA replication
cst03410
Base excision repair
cst03420
Nucleotide excision repair
cst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLOST_1407 (polA)
03410 Base excision repair
CLOST_1407 (polA)
03420 Nucleotide excision repair
CLOST_1407 (polA)
03440 Homologous recombination
CLOST_1407 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cst03032
]
CLOST_1407 (polA)
03400 DNA repair and recombination proteins [BR:
cst03400
]
CLOST_1407 (polA)
Enzymes [BR:
cst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLOST_1407 (polA)
DNA replication proteins [BR:
cst03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CLOST_1407 (polA)
DNA repair and recombination proteins [BR:
cst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CLOST_1407 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLOST_1407 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
XPG_I
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CBH21527
UniProt:
E3PRM3
LinkDB
All DBs
Position
complement(1562559..1565225)
Genome browser
AA seq
888 aa
AA seq
DB search
MDGALVSLEDIMDKLLILIDGNSLMNRAYYALPELMNKKGQHTNAIYGFANILFKIMDTY
KPSHISVAFDLKAPTFRHKQYDAYKGNRKKMPDELREQVEPLKKMIDAFGINRIELEGYE
ADDLIGTVAKNFEQDGFEVYIITGDKDALQLVSDKIKVLFTKKGISELDEYDPDKMTEKY
ELTPQQFIDLKGLMGDQSDNIPGVAGIGEKTGIKLLKEYGSIENIYMNIDEISKSVKAKL
EAGYDMAFLSKSLATIMVDIPLELKVDEFEKKDIDKNTLISLFSEFEFNSLIGKVGNDES
GLIDKVQKEYLISNDIELLIDKATSLKSLNLFSIAKSGLVSDKRLINLFVKIDEEFFNIE
EKDVLKLKDVFENPEIKKYGYNLKNDCLILKPYEINLTGLYFDIAIAEYLIDSTSSNYEI
KDIALKYNLGDVLSLEELLGKGKSKKDFKDLSDAQISGYACSVLDIVDKGKEALITTIEN
YNMHNLFYEVEMPLVEILADMEYIGISADKEVLNELKQKFDIEIKTLEASIYEYAGENFN
INSPKQLGHILFDKLGLPAIKKTKTGYSTNAEVLEALSDKHPIIDKITLYRQYTKLQSTY
VDGLLNIINPKTGRIHSSFNQTITTTGRISSTEPNMQNIPVRLEIGRELRKVFVAPEDMY
LVDADYSQIELRILAHIANDEGLIDAFSKGDDIHTITASEVFNVPLDEVTKELRSAAKAV
NFGIVYGISDFGLSNNLGISKQVAKEYIDNYFARYPYVKKYMEDIVEKAKNDGYVETYIG
RRRYIPELGSNNFIMKNLGKRLAMNTPIQGSAADVIKIAMVKVYARLKSEGLKSKLILQV
HDELIIESPDSEKSYVADLLKEEMESAVDLNVKLTVDAKWGKSWYETK
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggatggagctcttgtatcactggaggatataatggacaaattattgattttgatagat
ggaaacagtttaatgaatagagcttactatgctctgcctgaattgatgaataaaaaagga
cagcatacaaatgctatttatggatttgcaaatatattattcaaaataatggatacctat
aaaccaagccatatatcagtggcatttgacttaaaagcaccgacctttaggcataagcag
tacgatgcgtataaaggtaacagaaaaaagatgccggatgaactaagagagcaggtagag
cctcttaagaaaatgatagatgctttcgggataaatagaattgaacttgaaggctatgaa
gcagacgacttaataggtacagttgctaaaaattttgagcaagatggttttgaagtttat
ataattactggtgataaggatgctcttcaattagtaagtgataaaataaaggttttattt
actaaaaaaggaatttcagagctagatgaatatgatccagataaaatgactgaaaaatat
gagcttacgcctcagcaatttatcgatttaaagggattaatgggagatcagtcagataat
attcctggagtagcaggaataggcgaaaaaacaggaattaagcttttgaaagagtatgga
agcatagaaaatatctatatgaatatagatgagatttctaaaagcgtaaaagcaaagctt
gaggctggatatgatatggcttttctgagtaaaagccttgcaactattatggtagatatc
cctttagagcttaaagttgatgagtttgaaaagaaggatatagacaaaaatactttaatc
agtttgttttcagaatttgaatttaatagcttgataggtaaggttggaaatgatgaatct
ggtttgattgataaagtgcaaaaggagtatttaatttcaaatgatattgagttattaata
gataaagcaactagtttgaaatctttaaatttattttctattgcaaaatctggattagtt
agtgacaaaagattgataaatttatttgtgaagatagatgaagaattttttaatattgaa
gaaaaggatgtattaaagcttaaggatgtatttgagaatccagaaataaagaagtatgga
tataatctaaaaaatgactgtttaattttaaagccatatgaaataaatttgacagggctt
tattttgatatagccatagctgaatatctaattgattcaactagctcaaactacgaaatc
aaagatatagcgcttaaatacaatcttggggatgtgctatctttagaagagcttttgggc
aaaggtaaaagtaaaaaagactttaaagatttatcagatgctcagatatcaggctacgca
tgttcagttttagatattgttgataaaggaaaagaagctttaatcactactattgaaaat
tataatatgcacaatttattttatgaagttgaaatgccactagttgagattttagcggat
atggaatatataggcataagcgcagataaagaagtacttaatgaactaaaacaaaaattc
gatattgaaattaaaactttagaagcaagcatttatgaatatgctggagaaaacttcaat
attaactctccaaaacagcttggacatattttatttgataagcttgggcttccagcaatc
aaaaaaactaaaacggggtattctacaaatgctgaagttttagaagctttatcagataaa
catcctataatagataaaattaccttatatagacaatatacaaagcttcagtccacatat
gtagatgggcttttaaatataattaatccaaaaacgggcagaattcactcatcgtttaat
caaactattacaactactgggcgaatatcttcaactgagcctaatatgcaaaatatacca
gtacgtctagaaattgggcgcgaactaagaaaagtatttgtagctccagaggacatgtat
ttagtggatgctgactattctcagattgagcttcgaatcctagcacacattgctaatgac
gaaggacttattgatgctttttcaaaaggtgatgatattcatacaattacagcatcagaa
gtatttaatgtacccttagatgaggtcactaaagaactcaggagcgctgcaaaggcagtt
aattttggaatagtttatgggataagtgattttggcttatcaaataatcttggaatatca
aagcaagttgctaaagaatatatcgataattactttgcaagatatccatatgtaaaaaaa
tacatggaagatatagtagaaaaggcaaaaaatgatggttatgtagaaacttatattgga
agaagaagatacattcctgaactgggttcaaataattttataatgaagaatttaggaaaa
agattagctatgaacactccaattcaaggaagcgctgcagatgttataaaaattgcaatg
gtaaaagtatatgctagacttaaatctgaagggttaaaatctaaactgatactacaagtt
catgatgaacttataattgagtcacctgatagtgaaaaatcatatgtagcagatttatta
aaagaagaaatggaatccgctgtagacttaaatgttaaacttacagttgatgctaaatgg
ggaaaatcttggtatgaaacaaaataa
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