Corynebacterium striatum: CBE89_08210
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Entry
CBE89_08210 CDS
T05059
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cstr
Corynebacterium striatum
Pathway
cstr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cstr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CBE89_08210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cstr03021
]
CBE89_08210
03019 Messenger RNA biogenesis [BR:
cstr03019
]
CBE89_08210
Transcription machinery [BR:
cstr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CBE89_08210
Messenger RNA biogenesis [BR:
cstr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CBE89_08210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
AAA_22
SAP
AAA
Motif
Other DBs
NCBI-ProteinID:
ART21484
UniProt:
A0A2Z2J3Y6
LinkDB
All DBs
Position
complement(1723655..1725637)
Genome browser
AA seq
660 aa
AA seq
DB search
MSNTDKAAAQDYASLKLPELRKLAAERGLRGVSGLRKGDLITALTTGQVPAKATKAAKAA
KAVADVAPADAAAKQESAADAAESTNAGANPRRVRKATRKAGAAHDHAAQDHADKDNSAN
AAAAEAQNENKGEQKGDEQRYESRSQARRARRNRARRQERENAENNKSDNGSGNGAANEG
SQDSSNEQQGNQDKRENNDRGDRNDRGDRNDRSDRNERNDRGGRNNRRNNEDDDDNNGGR
RNRRNRRNRRNRGGNDNNGGGNDLQIREGDEVQAVGGILEVVDNNVAFLRTTGYRAASSD
VFVNNNLVRRLGLRSGDALTGQVKVSGPTHTHGNGRNRRKYNQLVQVDTVNGADPSTAQN
RPHFSKLTPLYPNQRLRLETDPKILTTRVIDLIMPIGKGQRALIVSPPKAGKTTILQNIA
NAISANNPECYLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSEHTSVAELAIERAKR
LVEQGKDVVVLLDSITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFLGAARNIEDGGS
LTIIATAMVETGSTGDTVIFEEFKGTGNAELKLDRAISERRIFPAVDVNPSGTRKDELLL
VPEEARIMTKLRRILSGLDSFAAIDLLIKQLKKTRSNGEFLMQVASSAPMVADKEAEDYI
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaatacggacaaagccgcagcacaggattacgcatccctgaagctgccggaactg
cgcaagcttgctgcagagcgcggccttcgaggcgtctctggattgcgcaagggggacctc
atcactgcactgaccactggccaggttccagccaaggccaccaaagctgccaaggccgca
aaggccgtagcggacgttgcgcctgccgacgccgcggcgaagcaggaatctgcagctgat
gcagctgaatcgacaaacgctggcgcaaacccgcgccgggttcgtaaggctacccgcaag
gccggtgccgcacacgaccacgcagcgcaagaccacgcggacaaggacaattccgcaaac
gccgctgccgccgaggctcagaacgagaacaagggcgagcagaagggcgacgagcagcgc
tatgagtcccgttcccaggcccgccgtgcccgccgtaaccgtgctcgccgccaagagcgc
gagaacgctgagaacaacaagtcggataacggctctggcaatggcgctgcgaacgagggt
tcccaagactcctccaacgagcagcagggcaaccaggacaagcgcgagaacaacgaccgc
ggcgaccgcaacgaccgcggcgaccgtaacgaccgcagcgaccgcaacgagcgcaatgac
cgtggtggtcgcaacaatcgtcgcaacaacgaagatgacgatgacaacaacggcggacgc
cgtaaccgtcgcaaccgtcgcaaccgccgcaaccgcggtggtaatgacaacaacggtggc
ggcaatgacctgcagatccgtgagggcgatgaggtgcaggcagtcggtggcatcctcgag
gtcgtggataacaacgtagcgttcctgcgcaccaccggttaccgcgcggcaagctccgac
gtcttcgtcaacaacaacctcgttcgccgcctgggcctgcgctctggcgacgccctgacc
ggtcaggtcaaggtctccggcccaacgcacacccacggcaatggccgcaaccgccgtaag
tacaaccagttggtgcaggttgacacggttaacggtgcggatccttcgaccgcgcagaac
cgcccgcacttctccaagttgaccccgctgtacccgaaccagcgcctgcgtctggagacc
gatccgaaaatcctgaccacccgcgtcatcgacctcatcatgccgatcggtaagggccag
cgcgcgctcatcgtctccccgcctaaggccggtaagaccaccatcctgcagaacatcgcc
aacgcgatctccgcaaataacccagagtgctacctcatggttgtcctcgtcgacgagcgc
ccagaagaggtcaccgacatgcagcgcagtgtcaagggtgaggtcattgcctccaccttc
gaccgcccgccatcagagcacacctccgtggccgagctcgccatcgagcgcgcaaagcgc
ctcgtggagcagggcaaggacgtcgtcgtcctgctcgactccatcacccgcctgggccgt
gcatacaacaactcctcgccggcttccggccgcatcctctccggcggtgtggactccaac
gccctgtacccgccgaagcgtttcctcggtgctgcccgcaacatcgaagacggcggctcc
ctgaccatcatcgctaccgcaatggtcgagaccggctccaccggtgacaccgtcatcttc
gaggagttcaagggcaccggcaacgccgagctcaagctcgaccgcgccatctccgagcgc
cgcatcttcccagccgtcgacgttaacccgtctggcacccgtaaggacgagctgctactc
gttccggaagaggcgcgcatcatgaccaagctgcgccgcatcctgtctggcctagactcc
ttcgccgcgatcgacttgctcatcaaacagctcaagaagacccgctccaacggcgagttc
ctcatgcaggtggcaagctctgcaccgatggtcgctgacaaggaagctgaggattacatc
taa
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