Cucumis sativus (cucumber): 101204996
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Entry
101204996 CDS
T02486
Name
(RefSeq) structure-specific endonuclease subunit SLX1 homolog
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csv03400
]
101204996
DNA repair and recombination proteins [BR:
csv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
101204996
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GFIT
Motif
Pfam:
GIY-YIG
Motif
Other DBs
NCBI-GeneID:
101204996
NCBI-ProteinID:
XP_004153269
UniProt:
A0A0A0M0Y6
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Position
1:22502128..22506472
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AA seq
395 aa
AA seq
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MRKRKEKPEICKTTDEEKEDDEEEERGNEVNGFFSCYLLASACPRFKGHTYIGFTVNPKR
RIRQHNGEIRCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATF
KSLSGVANKVKLAYTMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINEL
PCYSEGDQDMLENEGDWEYNREREEICGFRVYGSMKEVSNEVPQKLMDYQTGTDGRPPHV
LRGCDKELETNEQVPPSSCTPSYIDVGMSYDLCACDEGLENDEREAASCGQSCIVAGTSR
TEIVIDDEEENQLEGSSMNLQEQPGRENLTSGIASEISKVSRWNNGWVPTVEYEVIDVST
PSPDCRTSSHRFKRRVTSGKSEMIDLTKSPTFIQL
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagaggaaagagaaaccggaaatctgtaaaaccacggatgaggagaaggaagac
gatgaagaagaagagagaggaaacgaagtgaatggcttcttttcatgctatctcttggcc
tctgcttgccctcgtttcaaaggccatacctatatcggattcacagtgaacccgaagcgc
agaatcagacaacacaatggtgagattagatgcggtgcttggcgtactaagaggaagaga
ccttgggagatggtcttgtgcatttatggcttccctactaatgtttctgctcttcagttt
gaatgggcgtggcagcatcctaatgagtcactggctgtaagaagtgctgctgcaactttc
aagtctctctctggagttgctaacaaagttaaacttgcatacacaatgctcacacttcct
gcttggcgtggtttaaatataactgtaaactacttctctacaaagttcatgaagaatgcg
gctggttgcccaagtttgccagagcatatgaaggtccaagtttcccccatcaatgagctt
ccatgctattccgaaggagatcaagatatgcttgaaaatgaaggtgactgggagtataat
cgagaacgtgaagaaatttgtggttttcgagtgtatggatcaatgaaagaagtttcaaat
gaagttcctcaaaagttaatggattatcagacaggtacagatggaagacctcctcacgtg
ttgcgtggatgtgataaggagcttgagaccaatgaacaagtgccaccttcttcatgtact
ccgtcttatattgatgtgggtatgtcttatgacttgtgtgcatgtgatgaaggactcgag
aatgatgaaagagaggcagcttcgtgtggtcagtcttgcattgtagcaggtacatctaga
actgaaattgtcattgatgacgaagaggaaaaccaattagaagggagtagtatgaacttg
caggagcaaccaggtagggagaatttaacatcaggaatagcttctgaaatcagtaaagtt
tcaaggtggaacaatggctgggttccaactgttgagtatgaggttatcgatgtgtctacc
ccgtctccagactgccgaacaagttcgcatagattcaagagaagagttacttccggtaag
tctgagatgattgacttgactaaatctcctacatttattcaattgtag
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