Cucumis sativus (cucumber): 101212232
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Entry
101212232 CDS
T02486
Name
(RefSeq) threonine--tRNA ligase, mitochondrial 1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101212232
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csv01007
]
101212232
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csv03016
]
101212232
Enzymes [BR:
csv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
101212232
Amino acid related enzymes [BR:
csv01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
101212232
Transfer RNA biogenesis [BR:
csv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
101212232
Prokaryotic type
101212232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
tRNA-synt_His
Motif
Other DBs
NCBI-GeneID:
101212232
NCBI-ProteinID:
XP_004142299
LinkDB
All DBs
Position
5:complement(13201775..13222789)
Genome browser
AA seq
724 aa
AA seq
DB search
MLCGKIWKAKFLISFHCRPKTVPYSNHFLSSSFLRLLHNQLHNTQAAFMAAKHPKDEAYL
STTIPKRIQLFQSIQAQILADRSSLPSHQIKITLPDGTMKEGQKWKTAPLDVAKEISKSL
AANALIAQVDGVLWDMSRPLENDCELKLFTFDSDEGRDTFWHSSAHILGQSLEMEYGCKL
CIGPCTTRGEGFYYDAFYDDLGLNDDHFKQIESGALKAVSEKQPFERIEVTRQQALEMFS
DNKFKVEIINDLPEDKTITVYRCGPLVDLCRGPHIPNTSFVKAFACLKASSAYWRGNKDR
ESLQRVYGISYPDQKRLKEYLHLLEEAKKYDHRLLGTKQELFFCHPLSPGSWFFLPHGAR
IYNKLMDFMRAQYKDRGYEEVLSPNMYNMQLWETSGHASNYKENMFVFEIEKQEFGLKPM
NCPGHCLMFQHRVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQ
IKDEVRAVLEFIKYAYNIFGFTFELKLSTRPEKYLGDLETWEKAEAALTEALNEFGKPWQ
IDEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPARFELYYSAEDEAKRERPVMIHR
AILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQSYALKVRDLIHHAGYFVDVD
VTDRKIQKKVREAQLAQYNYILVVGEEEANTGQVSVRVRDKADHSVMSIESLLNHFKEEV
AAFH
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgtgggaaaatctggaaggcgaagtttctcatttcctttcactgccgccctaaa
acagttccatactccaatcacttcctctcttcatctttcctccgccttctgcacaaccaa
ctccacaacactcaagctgctttcatggcggccaaacaccccaaagacgaggcctacctc
agtaccaccattcccaaacgcattcaactttttcagtcaatacaagcacagatactcgct
gatcgttcttctcttccctctcatcaaatcaagatcaccttgcctgatgggacgatgaag
gagggtcagaaatggaaaactgcaccgttagacgtagcaaaagaaatttccaaaagctta
gctgcaaatgctttgattgctcaagttgatggagttttatgggacatgagcaggccgctg
gagaacgattgtgaacttaaactgttcacctttgacagcgacgaagggcgcgatactttc
tggcattcaagcgctcatatactcggacagtcgcttgagatggagtatggttgcaagctt
tgcattggaccctgtaccactagaggagagggattctattatgatgctttttatgatgat
ttaggcttgaatgatgatcacttcaagcaaattgaatctggtgccctgaaagctgtatcg
gagaaacaaccttttgagcgcattgaagttacaaggcaacaggctcttgaaatgttttca
gacaacaaattcaaggttgaaatcatcaatgacttgccagaagacaagactatcaccgtt
tacagatgtgggcccttggttgacttatgtcgtggtcctcacataccaaatacatcattt
gtcaaagcatttgcgtgtcttaaggcatcatcagcctactggaggggaaataaagatcgc
gaaagcttacaaagagtttatgggatatcatatcctgatcaaaagcgtttaaaggagtac
cttcatttgcttgaagaggcaaagaagtatgatcacaggttattgggtacaaaacaggag
cttttcttttgtcatccactcagcccaggaagttggttcttcctccctcatggggctcga
atctacaataaattgatggacttcatgcgagctcaatataaggatcgcggctatgaagag
gttttgtcaccaaatatgtacaatatgcaactatgggaaacttctgggcatgcttcaaat
tacaaggagaatatgtttgtatttgagatagagaagcaggaatttggattgaaaccaatg
aattgtcctggtcactgtttgatgttccagcatagagttcgttcatatagggaacttcct
cttcgattagctgattttggggttttgcatcgcaatgaggctagtggggcattgactgga
ttgactcgtgtgagaagatttcaacaggacgacgctcacatattttgcagggagtcccag
ataaaagatgaagtaagggccgtcttagaattcatcaaatatgcttataacatttttggg
ttcacatttgagctgaagctatcaacgaggccagagaaataccttggagatttggaaacg
tgggagaaggctgaagctgctcttacagaagcactgaatgagtttgggaaaccatggcag
atcgatgaaggagatggtgcattttatggaccaaagatagatattagtgtatctgatgca
ctgaaaaggaaatttcagtgtgcaacccttcagctggacttccaacttccggcacgtttt
gaattgtattactctgcagaggacgaggctaagagggaacgcccagttatgattcacaga
gctattttaggttctgttgagcggatgtttgctatattgttggagcactacaaggggaag
tggcctttttggcttagtccacgtcaagcaattgtttgccctgtatcagagaaatcccag
tcctatgcactgaaggtgcgtgatctaattcatcatgctggttattttgttgatgtggat
gtgacagacagaaagattcagaagaaagtacgagaagcacagttggcacaatataactac
atactggttgttggtgaggaggaggccaacactggacaggtgagtgttcgagtgagagat
aaggctgatcattcagtgatgagcattgagagcttgctcaaccacttcaaggaagaagtt
gcagcctttcattaa
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