Cucumis sativus (cucumber): 101213010
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Entry
101213010 CDS
T02486
Name
(RefSeq) twinkle homolog protein, chloroplastic/mitochondrial isoform X1
KO
K17680
twinkle protein [EC:
5.6.2.3
]
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
csv03029
]
101213010
Enzymes [BR:
csv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
101213010
Mitochondrial biogenesis [BR:
csv03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
101213010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
Toprim_2
DnaB_C
Toprim
AAA_25
AAA_29
Motif
Other DBs
NCBI-GeneID:
101213010
NCBI-ProteinID:
XP_011659237
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All DBs
Position
1:complement(23521785..23552408)
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AA seq
714 aa
AA seq
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MRFLHHNHRLYNPFSKLSSFSSPFRLMGSFPLCKSTSLVFLSHLSSSFSQKYFLYRSISL
LHGSFPVRPLSLVKPFAMKPNGVSSFTSHANVPRPPALLGNPPDKASISTRLNILRKKLQ
DLDIDIEACVPGQFSSLLCPMCKGGDTKERSFSLNISEDGEAAVWNCFRGKCGWKGHTLA
FTDGRSSYKDLGQVALKQNIRKITVESLQLEPLCDELVDYFAERLISKQTLLRNSVMQKR
SNNQIAVAFTYYRGGALISCKYRDAKKRFWQEAKTEKIFYGLDDIDGASDIIIVEGEIDK
LSMAEAGIHNCVSVPDGAPPSVSKKNVPPAHQARKFQYLWNCRDYLNKALRIILATDGDT
PGQALAEEIARRVGKERCWRVKWPKKDEVDHFKDANEVLMYLGPEALKEVVDNAELYPIS
GLFRFKDYFHEIDAYYHKKFGNEFGVPTGWRCLNDLYNVVPGELTIVTGVPNSGKSEWID
ALLCNLNASVGWKFALCSIENKVGEHARKLLEKHIKKPFFGGRYGGSVERMSVEELEQGK
QWLNDTFFILRCENKSLRSISWVLDLAKAAVLRHGVSGLVIDPYDELDHQRLPNQSETEY
VSQMLTEVKQFAQHNACHVWFVAHPMQLQNWSGCPPNMHDISGNAHFINKCDNGIVIHRN
RDPESGPIDLVQVCVRKVRNKVAGTIGEAYLAYNRVTGEFFDAAGDMKLKKPSS
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttcttcatcacaatcaccgtctctataaccccttttcaaaactctcttcattt
tcctcaccatttcgtctaatgggttcctttcctttatgcaaatcaacctctctggttttc
ctgtcacacctttcttcttctttttcgcagaagtatttcctgtacagaagcatttctctt
ctccatggttcatttcctgtacgacccttgtcccttgtgaaaccctttgccatgaaacca
aatggggtttcttcttttacttctcatgccaatgttcccagacctccagcccttttgggg
aatccaccagacaaggcttcaatctccactcgattgaatattctaagaaaaaaattgcag
gatcttgacattgatatcgaagcttgtgttcctgggcagttttccagtttgctttgtcca
atgtgtaaaggtggtgatacaaaggaacgatccttctccctaaatatctcagaagatggg
gaggctgctgtttggaattgttttcgtggaaaatgtggttggaaaggccatactctggcc
tttactgatggtcggtcatcatataaagatttaggacaagttgcacttaagcagaacata
cggaaaattacagtggagagtctacaacttgaaccactgtgcgatgagctggttgattat
ttcgcggagcgattgatatccaagcaaacattgttaagaaattcagttatgcagaaaaga
tccaataatcagattgctgttgcatttacatattatcgaggtggagcattaattagttgc
aagtatcgtgatgccaagaaaaggttctggcaggaggccaaaactgagaaaatattttat
ggattggatgacatagatggtgcaagtgatatcatcatagttgaaggggagatagacaag
ctctcaatggcagaagctggtatccataattgcgtgagtgttcctgatggtgcaccacca
tcagtttccaaaaaaaacgtacctcctgcacatcaggccagaaagtttcagtatctatgg
aactgcagagactacttgaacaaggccttgcgtattatacttgctactgatggggatacg
cctggtcaagctttagcagaggagattgcacgccgtgttgggaaggaaagatgttggagg
gtcaaatggccaaaaaaggatgaggtcgatcatttcaaagatgcaaatgaggttttgatg
tacttgggccctgaggccctgaaggaagttgttgacaacgcagagttgtatcctataagt
ggattatttcgcttcaaagactacttccacgagattgatgcatattatcacaaaaaattt
ggaaatgagtttggtgtgccgactggatggaggtgtctcaatgatttgtacaatgttgtc
ccaggggagcttaccattgttactggtgttccgaattcaggcaaaagtgagtggattgat
gctctgctatgcaatcttaatgcaagtgttggttggaaatttgctctctgctctatagaa
aataaggttggagaacatgcaagaaaactactggagaaacacatcaagaagcctttcttt
ggtggacgttatggtggctctgttgaacgaatgagtgttgaggagttggagcaaggcaag
caatggctaaacgatacattttttattttaaggtgtgaaaataagtccctccgaagtatt
agttgggtcttggatcttgcaaaagcagcagttttaaggcatggagtttctggactggta
attgacccttatgatgagcttgaccatcaacggcttccaaatcaaagcgaaacagagtat
gtgagccagatgcttacagaggtcaaacagtttgctcaacataatgcttgccatgtttgg
ttcgttgcacatcctatgcagttgcagaattggtctggatgtccacctaatatgcatgat
ataagtggaaatgcacacttcataaataaatgtgataatggaattgtcattcatcgtaat
agggatcctgaaagtggtcctattgatctcgtacaggtatgtgtacgaaaagtgagaaat
aaggttgcaggaacaattggggaagcttatttggcatataatagggtaaccggagaattc
ttcgatgctgctggggatatgaaacttaagaaaccatcatcttga
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