Cucumis sativus (cucumber): 101216298
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Entry
101216298 CDS
T02486
Name
(RefSeq) DNA ligase 6 isoform X1
Organism
csv
Cucumis sativus (cucumber)
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Gene cluster
GFIT
Motif
Pfam:
DRMBL
DNA_ligase_A_N
UBA_4
RMMBL
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
101216298
NCBI-ProteinID:
XP_011653418
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Position
4:8146644..8152246
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AA seq
882 aa
AA seq
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MASESSTPKPLAIDSSLCFVTAIESFSRQLSLSLPPLKLPFRPPPFPSDFPQSKLIPKSR
FVVDAFAHAGDYSLSYFLSHFHSDHYGGLSPTWCKGIIFCSHLTARLLLEVLKVPLPFVY
PLPLREPTTIDGCEVILVDANHCPGAVQFLFKIPCGDGKFERYVHTGDFRFFDSMRVDPV
LEMFIGSDAVFLDTTYCHPKFIFPSQEESIEYIVNIIQKIGGASKGSMGNVLFLVATYVI
GKEKILLQIASRCNRKIMVDAKKMTVLRVLGYGESGVFTEHESESDVHVVGWNVLGQTWP
FFRPNFVRMKDIMVEKGYSKVVGFVPTGWTYEFKHNKFSVRSKDSLEIHLVPYSEHSNYN
ELSEYVKFLRPKRVVPTVGLDVDKLDSKHADKIKKHFAGLVDEMANRKEFLKGFQRGSGE
MSDDVDENATKAETEFLEFKEKEISSCMKISVKTEASSSGMGLSSLQEVGSTDLFESNDG
EQQKIIQELRECLPAWVTQDQILDLISSSGRNVVDAVSNFYERETEFYEHISTLTDICPK
YPSKVSDSPFIFPATDNKKVVVLGEIDISSGHASKSSSPRGTAKTKTSPAKRKRNIQDKP
KNKSRKNLILQSDGSKQSTITKFFRKTPHFSDCPKMESIEEQNCQDQSSPNGITEYVNKI
DKFIQIINGDESLKTLVASLLVKTNGDMNMALDLYYTNHQERLGQNEKGHIFSANPIQTE
SNSDECLSTQKKNMLENIGLETDLSKKINETFVSLPPEDYDPVKHACWRYGQPAPYIHLV
RTFDLLEEEKGKIKATSMLCNMFRSLLVLSSEDVLPAVYLCTNKIAADHENMVLLLNFIL
YKLCFNNIKFTLCFWMSVLLPDESYARKLLPFIINCFSPHSF
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgaatcttccacacctaaacccctagcaatcgactcttccctctgcttcgtc
actgctatcgaatcgttttcgcggcaactgagtttatctcttcctccgttgaaacttcca
ttccgaccccctccttttccctccgatttcccccaatccaaactcatcccaaaatcccgt
ttcgtggtcgacgcatttgcccacgccggcgattactctctttcatatttcctttctcat
tttcattccgatcactatggtggtctctcccctacctggtgcaagggtattatcttctgc
tcccaccttactgctcgccttttgctcgaagttctcaaagtccctctgccattcgtctac
ccattgccgcttcgggagcctacaacaatagatggctgtgaggtaatactagttgatgcc
aatcattgtcctggtgcagtccagttcttgtttaagattccttgtggggatgggaagttt
gagagatatgttcatactggggattttcggttttttgattctatgagagtcgaccctgtt
ttggaaatgtttattggctcggatgcggttttcttggatactacgtactgtcatccgaag
tttatttttccttcccaggaggagtctattgaatatatagttaacatcatacaaaaaatt
ggaggtgcaagtaagggttctatggggaacgttctttttctagtcgcaacttatgtgatt
ggaaaggaaaaaattttgcttcaaattgcgagtcgatgtaatcgtaagataatggtggat
gctaagaaaatgacagtcttacgtgttttgggatatggtgagagcggggtgtttaccgag
catgaaagtgaaagtgatgttcatgttgttggatggaatgtgttgggtcaaacgtggcct
ttttttaggcctaattttgttagaatgaaggatataatggtggaaaagggttattcgaaa
gtcgttggttttgttccaacagggtggacttatgagtttaaacacaacaagttctccgta
aggtccaaggattcactagagatacatctggtgccatatagtgaacactcaaactacaat
gaacttagtgaatatgtgaagtttttgagacctaaaagagttgttcccactgtgggtttg
gatgttgataaacttgatagcaagcatgctgataaaattaaaaagcactttgctggttta
gttgatgaaatggccaacagaaaagaattcttaaaagggtttcaacgtggatctggtgaa
atgagtgatgatgttgatgaaaatgccacaaaggctgaaactgagttcctggagttcaaa
gaaaaggaaatttcatcgtgtatgaagataagtgtcaaaaccgaagcatccagtagtggt
atgggtttgtcttctctgcaagaagttggttctaccgatctatttgagtcaaatgatggg
gaacaacagaagattatccaggaacttcgtgagtgcttgcctgcatgggtcactcaggat
cagatattagatctgattagcagctctgggagaaatgttgttgatgcagtttctaatttt
tatgaacgagaaactgaattttatgaacacatttcaactctaacggatatctgtcccaag
tacccaagtaaagtatcagatagcccgtttatttttcctgcaacagataataaaaaggtg
gtcgttttgggagaaattgacatttcttcaggccatgcttcaaagtcatccagtccaagg
gggacggccaaaactaaaacttctcctgctaaaaggaagagaaacattcaagataagccc
aaaaataagtcgagaaagaatttaattctgcaatctgatgggtctaagcaatctacaatc
acaaagttcttcaggaaaactccacatttttcagattgtcctaaaatggaatctatagaa
gagcaaaattgtcaagatcaaagttctccaaacggtattaccgaatatgtaaacaagatt
gacaagtttattcaaataataaatggtgacgaatcattaaaaacacttgttgcatcatta
ttggtaaagacaaacggagacatgaatatggcacttgatttgtattatactaatcatcag
gagagacttggtcaaaatgaaaagggtcacatcttcagcgcgaacccaatccaaactgaa
agcaattcggatgaatgcttatctactcagaagaaaaacatgctagaaaatattggactt
gagactgatttgtctaagaagataaatgaaacttttgtatcccttccacctgaagattat
gatccagtcaagcatgcctgttggcggtatggacagcctgccccatatatacatcttgta
cgtacttttgatctgcttgaagaggaaaaagggaagataaaagctacatctatgctttgc
aatatgtttagaagtttattggttttgtcttctgaggatgtgctgcctgcagtgtattta
tgcactaacaaaattgctgctgaccatgaaaacatggttttgttacttaactttattctc
tataaattatgtttcaataatataaaatttaccttgtgtttttggatgagtgttctttta
cctgatgaaagttatgcacggaagttgttaccttttatcattaattgtttttctccccat
tcattttaa
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