Cucumis sativus (cucumber): 101216726
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Entry
101216726 CDS
T02486
Name
(RefSeq) pre-mRNA-processing protein 40C
KO
K12824
transcription elongation regulator 1
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101216726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csv03041
]
101216726
Spliceosome [BR:
csv03041
]
Complex A
U1 snRNP components
U1 related factors
101216726
Complex B
101216726
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
101216726
NCBI-ProteinID:
XP_011659583
UniProt:
A0A0A0K978
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Position
7:complement(21205108..21217022)
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AA seq
845 aa
AA seq
DB search
MSSASTVSQSVSLPAPPTSNSAANGSSIPNLIPSTSPVPPAPSFHIHQLPSVAPMVPGPP
GMSPSMPLVSTGPAVLFPPTDSASTIPGPNMHAIHNPIHPSARPQICGSYPSLTPVVSPP
HAMWFQPPQLGAMPRPPFLPYSTSYHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVASGI
SVPSGHGNQLIGNTLIQTDSNHPELDSHKHAQGVGHSENISLNKHSEDWTAHKTEAGIIY
YYNALTGESTYEKPSGFRGEAENLMAQATSVSMSNLSGTDWVLVTMGDGKKYYYNNKTKI
SSWQIPNEVSELRQQNDEKTKELSAPLPNNNASTDLGTSSTSINTPAINTGGREATPLRT
VGISGSSSALDLIKKKLQDSGTPVASSPISAPTVAQSDVNLPRDADATVKALQTENKDKP
KDANADGNVSDSSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDPRF
KAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEDIDHTTSYQTFK
KKWGNDSRFEALDRKDRENLLNERVLCLKKAAVEKAQALWAASTTSFKSMLQEREDININ
SRWFRVKDSLREDPRYRSVKHEEREMLFNEYISELKAAEEEKQRESKARKEEQEKLKERE
REWRKRKEREEQEMERVRLKVRKKEAVASFQALLVESIKDPQASWTESKVKLEKDPQGRA
SNTDLDSSETEKLFREHVKMLQERCANEFRNLLSESFTAEVVAQVSEDGKTVLNSWTMAK
RILKPDPRYGKVPRKEREALWRRYADDTVRKQKLANDHKGEKYNDYKNRATTDAGKFPSK
PRIHD
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagcttcaactgtctcccaatctgtgtcactacctgctcctcctacttcaaat
tccgctgctaatggttcttcaattcctaatttgatcccctccacttcaccggttcctcct
gccccatctttccatattcatcaactaccgtccgtagctccgatggttcctggtccacct
ggaatgtcaccgtcgatgccacttgtgtccacgggtccggcagttttgtttccgcccacc
gattctgcttctactattccaggacccaatatgcatgcaattcataacccaattcatcct
tctgctcgtccacaaatttgtggctcctatccttctctaactcctgttgtatctccacct
catgcgatgtggtttcagcctcctcagttgggagccatgcccaggcctccctttctgccg
tactctacttcttatcatggccctcttccttttcctgctcgtggaatgccccttccttct
gttccattgccggatcctcaacctcccggtgttacccctgttcaagttgcatctggcatt
tctgtgccatctggtcatggaaatcagcttattggcaatacattgattcagacagactca
aatcatcccgaacttgatagccataaacacgctcaaggtgtagggcattctgagaacatc
tctttaaataagcactcggaggattggactgcccacaaaactgaggcaggaataatttat
tactataatgccttgaccggagaatctacctatgaaaaaccttcaggtttcagaggggag
gctgaaaatctcatggcgcaggcaacgtcagtttcaatgtcaaacttgtctggtacagat
tgggttttggttactatgggtgatggtaaaaagtactactacaacaacaaaacgaagatt
agcagttggcaaatcccaaatgaagtgtctgaattgaggcaacagaatgatgaaaaaaca
aaagaactttcagctcctttgccaaataacaatgcatcgactgatctaggaacttcctct
accagtatcaatactcctgccattaatacaggtggccgtgaagccacacctcttagaaca
gtaggaatatcagggtcatcttctgctctggatttgatcaagaaaaaattgcaagactct
ggaactccggtagcttcctcacctatttctgcaccaacagtagctcaatcagatgtaaat
ctgcctagagatgctgatgctacagtcaaggcactgcagactgagaacaaagataagcca
aaagatgccaatgctgatggaaatgtatccgactcttcctcggactccgaggatgtagac
agtgggccaactaatgagcaattaattatccagtttaaggaaatgcttaaggagcgagga
gtggcaccattctctaaatgggacaaggaattgccgaagatagtttttgatccccgtttt
aaggctattcccagttattcagctaggcggtccttgtttgaacactatgttaagacccgt
gctgaggaagaacgcaaggaaaagagagctgctcagaaggctgcaatagagggatttaaa
cagttactggatagcgcatctgaggatattgatcacacaaccagttaccaaacattcaaa
aagaaatgggggaatgactcgcggtttgaagctttggatcgtaaggatcgggagaattta
ttgaacgaaagggtcctttgtctgaagaaggctgccgttgaaaaggcacaagctttatgg
gccgcttccaccactagtttcaagtccatgctgcaggagagagaagatatcaacatcaat
tcccgttggttcagggtaaaagatagtctacgggaagatccaagatacagatctgttaag
catgaggagcgtgagatgttattcaatgagtatatatctgaacttaaggctgctgaggag
gaaaagcagcgtgaatcaaaagctagaaaggaggagcaggagaaactgaaggaaagggag
agagaatggcggaaaaggaaggaaagagaagagcaagaaatggaaagggtacgcctaaaa
gtacggaaaaaggaggcagttgcatcttttcaagcattgcttgttgaatcgatcaaagac
cctcaggcctcttggaccgagtcaaaagttaaactggagaaggatccacaaggtcgtgca
tccaatactgatttagattcatctgagacagaaaaattattcagagaacatgtaaagatg
ctgcaggagcggtgtgcaaacgagttccgaaatctattatcagaatcctttacagcagaa
gtagttgctcaggtatcggaagatggaaagacggttcttaattcatggacgatggctaaa
cgaatcttgaagcccgatcccagatatggtaaagtcccaaggaaggaaagggaggcactt
tggcgtcgatatgctgatgatacagtgcggaagcagaagctggcaaatgatcacaaggga
gaaaaatataacgactataagaatagagcaaccaccgacgctggaaaattcccttctaaa
ccaagaatccatgactga
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