KEGG   Cucumis sativus (cucumber): 101216726
Entry
101216726         CDS       T02486                                 
Name
(RefSeq) pre-mRNA-processing protein 40C
  KO
K12824  transcription elongation regulator 1
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101216726
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csv03041]
    101216726
Spliceosome [BR:csv03041]
 Complex A
  U1 snRNP components
   U1 related factors
    101216726
 Complex B
    101216726
SSDB
Motif
Pfam: FF WW RhoGAP-FF1
Other DBs
NCBI-GeneID: 101216726
NCBI-ProteinID: XP_011659583
UniProt: A0A0A0K978
LinkDB
Position
7:complement(21205108..21217022)
AA seq 845 aa
MSSASTVSQSVSLPAPPTSNSAANGSSIPNLIPSTSPVPPAPSFHIHQLPSVAPMVPGPP
GMSPSMPLVSTGPAVLFPPTDSASTIPGPNMHAIHNPIHPSARPQICGSYPSLTPVVSPP
HAMWFQPPQLGAMPRPPFLPYSTSYHGPLPFPARGMPLPSVPLPDPQPPGVTPVQVASGI
SVPSGHGNQLIGNTLIQTDSNHPELDSHKHAQGVGHSENISLNKHSEDWTAHKTEAGIIY
YYNALTGESTYEKPSGFRGEAENLMAQATSVSMSNLSGTDWVLVTMGDGKKYYYNNKTKI
SSWQIPNEVSELRQQNDEKTKELSAPLPNNNASTDLGTSSTSINTPAINTGGREATPLRT
VGISGSSSALDLIKKKLQDSGTPVASSPISAPTVAQSDVNLPRDADATVKALQTENKDKP
KDANADGNVSDSSSDSEDVDSGPTNEQLIIQFKEMLKERGVAPFSKWDKELPKIVFDPRF
KAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDSASEDIDHTTSYQTFK
KKWGNDSRFEALDRKDRENLLNERVLCLKKAAVEKAQALWAASTTSFKSMLQEREDININ
SRWFRVKDSLREDPRYRSVKHEEREMLFNEYISELKAAEEEKQRESKARKEEQEKLKERE
REWRKRKEREEQEMERVRLKVRKKEAVASFQALLVESIKDPQASWTESKVKLEKDPQGRA
SNTDLDSSETEKLFREHVKMLQERCANEFRNLLSESFTAEVVAQVSEDGKTVLNSWTMAK
RILKPDPRYGKVPRKEREALWRRYADDTVRKQKLANDHKGEKYNDYKNRATTDAGKFPSK
PRIHD
NT seq 2538 nt   +upstreamnt  +downstreamnt
atgtcttcagcttcaactgtctcccaatctgtgtcactacctgctcctcctacttcaaat
tccgctgctaatggttcttcaattcctaatttgatcccctccacttcaccggttcctcct
gccccatctttccatattcatcaactaccgtccgtagctccgatggttcctggtccacct
ggaatgtcaccgtcgatgccacttgtgtccacgggtccggcagttttgtttccgcccacc
gattctgcttctactattccaggacccaatatgcatgcaattcataacccaattcatcct
tctgctcgtccacaaatttgtggctcctatccttctctaactcctgttgtatctccacct
catgcgatgtggtttcagcctcctcagttgggagccatgcccaggcctccctttctgccg
tactctacttcttatcatggccctcttccttttcctgctcgtggaatgccccttccttct
gttccattgccggatcctcaacctcccggtgttacccctgttcaagttgcatctggcatt
tctgtgccatctggtcatggaaatcagcttattggcaatacattgattcagacagactca
aatcatcccgaacttgatagccataaacacgctcaaggtgtagggcattctgagaacatc
tctttaaataagcactcggaggattggactgcccacaaaactgaggcaggaataatttat
tactataatgccttgaccggagaatctacctatgaaaaaccttcaggtttcagaggggag
gctgaaaatctcatggcgcaggcaacgtcagtttcaatgtcaaacttgtctggtacagat
tgggttttggttactatgggtgatggtaaaaagtactactacaacaacaaaacgaagatt
agcagttggcaaatcccaaatgaagtgtctgaattgaggcaacagaatgatgaaaaaaca
aaagaactttcagctcctttgccaaataacaatgcatcgactgatctaggaacttcctct
accagtatcaatactcctgccattaatacaggtggccgtgaagccacacctcttagaaca
gtaggaatatcagggtcatcttctgctctggatttgatcaagaaaaaattgcaagactct
ggaactccggtagcttcctcacctatttctgcaccaacagtagctcaatcagatgtaaat
ctgcctagagatgctgatgctacagtcaaggcactgcagactgagaacaaagataagcca
aaagatgccaatgctgatggaaatgtatccgactcttcctcggactccgaggatgtagac
agtgggccaactaatgagcaattaattatccagtttaaggaaatgcttaaggagcgagga
gtggcaccattctctaaatgggacaaggaattgccgaagatagtttttgatccccgtttt
aaggctattcccagttattcagctaggcggtccttgtttgaacactatgttaagacccgt
gctgaggaagaacgcaaggaaaagagagctgctcagaaggctgcaatagagggatttaaa
cagttactggatagcgcatctgaggatattgatcacacaaccagttaccaaacattcaaa
aagaaatgggggaatgactcgcggtttgaagctttggatcgtaaggatcgggagaattta
ttgaacgaaagggtcctttgtctgaagaaggctgccgttgaaaaggcacaagctttatgg
gccgcttccaccactagtttcaagtccatgctgcaggagagagaagatatcaacatcaat
tcccgttggttcagggtaaaagatagtctacgggaagatccaagatacagatctgttaag
catgaggagcgtgagatgttattcaatgagtatatatctgaacttaaggctgctgaggag
gaaaagcagcgtgaatcaaaagctagaaaggaggagcaggagaaactgaaggaaagggag
agagaatggcggaaaaggaaggaaagagaagagcaagaaatggaaagggtacgcctaaaa
gtacggaaaaaggaggcagttgcatcttttcaagcattgcttgttgaatcgatcaaagac
cctcaggcctcttggaccgagtcaaaagttaaactggagaaggatccacaaggtcgtgca
tccaatactgatttagattcatctgagacagaaaaattattcagagaacatgtaaagatg
ctgcaggagcggtgtgcaaacgagttccgaaatctattatcagaatcctttacagcagaa
gtagttgctcaggtatcggaagatggaaagacggttcttaattcatggacgatggctaaa
cgaatcttgaagcccgatcccagatatggtaaagtcccaaggaaggaaagggaggcactt
tggcgtcgatatgctgatgatacagtgcggaagcagaagctggcaaatgatcacaaggga
gaaaaatataacgactataagaatagagcaaccaccgacgctggaaaattcccttctaaa
ccaagaatccatgactga

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