Cucumis sativus (cucumber): 105436296
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Entry
105436296 CDS
T02486
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv00040
Pentose and glucuronate interconversions
csv01100
Metabolic pathways
Module
csv_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105436296
Enzymes [BR:
csv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
105436296
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GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
105436296
NCBI-ProteinID:
XP_011659855
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Position
5:16994966..16996439
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AA seq
387 aa
AA seq
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MGKGQSNDGDFDVTKFGAMPNTEIFQALTDAWKAACGSASQSQVLIPQGAYKLSKIQLTG
PCKSHIQIQLQGILQAPVDLVGDNWISFQNIDQFTLTGKGVFDGQGKIAWGKNDCNKNPN
CAKLPINVRFDYIKNSIVSDITSKDSKSFHFNVLGCKNLTFKHVNINAPQDSPNTDGIHI
GRSIGINVINTKISTGDDCISLGDGSQQVTITNVTCAPGHGISVGSLGRYVGETPVQGVI
AKNCTLINTTNGVRIKTRPSSPSFGVASDIHFEDIIMVNVINPLVIDQEYCPWNQCDKKN
PSKVKISNVSFINIRGTAANTLAVSFVCSSQFPCEDIEVTDINLTYNGSGGPIASMCKNV
KPKLSGVQNPHICPSSALSPSFAPSPF
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaggacaatctaatgatggcgattttgatgtgaccaaattcggtgctatgcct
aatactgaaatatttcaggccctcacagatgcatggaaggcggcttgtgggtcagcaagt
caaagtcaagtacttattccacaaggagcctacaaattaagtaaaattcaattgacaggt
ccttgtaaaagtcatatccaaattcaactccaaggaatattgcaggctcctgtagatctt
gtcggagacaattggattagttttcaaaatatcgatcaatttaccttgacaggtaaagga
gtttttgatggacaaggaaaaatagcttgggggaaaaacgattgcaacaaaaacccaaat
tgtgccaaacttcccataaatgtgaggtttgactacatcaaaaattccatcgtgagtgac
ataacctcaaaagatagtaaaagctttcattttaatgtattgggttgtaagaaccttacc
ttcaaacatgtgaacataaatgcgccacaagatagtcccaatacagatggaattcacatc
ggtcgttcgattggtattaatgttataaatacaaagattagtactggagatgattgtatc
tcactaggagatggtagtcagcaagtaacaataactaatgtaacatgcgctcctggacat
ggtataagtgtaggaagtttaggaaggtatgttggtgaaacacccgttcaaggagtcata
gctaagaattgcacattgataaatacaactaatggtgttagaatcaaaactcgaccatct
tctcctagttttggagttgcttctgatatccatttcgaagatataataatggttaatgtc
attaatccacttgtcattgatcaagagtattgcccctggaaccaatgtgataaaaagaac
ccatcaaaagttaagattagcaatgttagctttataaatatcagaggtactgcagcgaac
acacttgctgtcagttttgtttgtagttcgcaatttccatgtgaagatatagaggtgact
gacattaacctcacttataatggaagtggtggccctattgcatctatgtgtaaaaatgtg
aagcccaaactttcaggagtacaaaaccctcatatttgtccttccagtgctctgagtcct
tcctttgccccgagtcctttttaa
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