Cronobacter sakazakii Sp291: CSSP291_00485
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Entry
CSSP291_00485 CDS
T02461
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
csz
Cronobacter sakazakii Sp291
Pathway
csz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CSSP291_00485 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csz03400
]
CSSP291_00485 (uvrA)
DNA repair and recombination proteins [BR:
csz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CSSP291_00485 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CSSP291_00485 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
nSTAND1
AAA_29
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_25
AAA_23
NACHT
Viral_helicase1
T2SSE
cobW
ExoX-like_C
ScfRs
Motif
Other DBs
NCBI-ProteinID:
AGE84697
LinkDB
All DBs
Position
complement(90004..92829)
Genome browser
AA seq
941 aa
AA seq
DB search
MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLYARVGEPRC
PDHDVTLAAQTVSQMVDNVLALPEGKRLMLLAPVIKERKGEHTKTLENLASQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVVDRFKVREDLAQRLAESFETALELSGGTAVVADMDDE
KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVVQNGEL
SLAGGAIRGWDRRNFYYFQMLRSLAEHYKFDVEAPWNTLSDKVQKAVLFGSGKETIEFKY
MNDRGDTSVRRHPFEGVLHNMERRYKETESNAVREELAKFISNRPCATCEGTRLRREARH
VFVENTALPTISDMSIGHAMEFFNNMKLSGQRAKIAEKVLKEIGDRLKFLVNVGLNYLTL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRNLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGQVVAEGPLDAIMAVPESLTGQFMSGKRKIEV
PKERVKADPEKVLKLTGARGNNLKDVTLTLPVGLFTCVTGVSGSGKSTLINDTLFPIAQR
QLNGATIAEPAPYRDVQGMEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE
ARARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLAVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPLLK
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggataagatagaagttcggggcgcccgcacccacaatctcaaaaatatcaatctcgtc
attccgcgcgacaaactgatcgtcgtgaccgggctgtcgggttccggcaaatcttcgctg
gctttcgacacgctctacgccgaagggcagcgccgttatgtcgagtcgctttccgcctac
gcgcggcagtttctgtcgctgatggaaaagccggatgtcgatcatatcgaagggctgtcg
cctgctatctccatcgagcagaaatcgacgtcccataacccgcgttctaccgtggggact
atcacggaaatccacgactatctgcgtctgctctacgcccgcgtcggcgaaccgcgctgc
ccggatcatgacgttacgcttgcggcacaaaccgtcagccagatggtcgataacgtgctg
gcgctgccggaaggcaaacgcctgatgctgcttgcgccggtcattaaagagcgcaaaggc
gagcacaccaaaacgctggaaaacctggcaagccagggctatattcgcgcgcgtatagat
ggcgaagtgtgcgatctctctgatccaccgaagctggaattgcagaagaagcacaccatc
gaagtggtcgtggaccgctttaaggtacgtgaagatttagcgcagcgcctggccgaatcg
tttgaaaccgcgcttgagctttccggcggtacggcggtcgtggcggatatggatgacgaa
aaagcggaagagctgctgttctccgccaacttcgcctgcccgatttgcggctacagtatg
cgcgagcttgagccgcgcctcttttcgtttaacaacccggctggcgcatgcccgacctgt
gatggtcttggcgtgcagcaatattttgacccggatcgcgtggtgcagaacggcgagctg
tcgctcgcgggcggtgccatccgcggctgggatcgccgcaatttttactatttccagatg
ctgcgctcgctggcggaacactataagtttgacgtcgaagcgccgtggaatacgctcagc
gataaagtgcagaaagcggtgctgttcggctccggtaaagaaaccatcgaattcaaatat
atgaacgatcgcggcgatacgtccgtgcgtcgtcatccgtttgaaggcgtgctgcacaat
atggagcgccgctacaaagagaccgaatccaacgcggtgcgcgaggagctggcgaaattt
atcagcaatcgcccgtgcgccacctgcgaaggtacgcgtctgcgtcgcgaagcgcgccac
gtgtttgtcgaaaacaccgcgctgccgaccatttccgacatgagcatcggccacgccatg
gagttcttcaataacatgaagctctccggtcagcgcgccaaaattgctgaaaaagtgctg
aaagagattggcgatcgcctgaaattcctggtgaacgtcggcctgaactacctgacgctc
tcccgttcggcggaaacgctttcgggcggcgaggcgcagcgtatccgtctggcaagccag
attggcgcgggcctggtgggcgtgatgtatgtgctggatgagccgtccatcggcctgcac
cagcgcgataacgaacgtttgctcggtacgctgattcacctgcgtaatcttggcaatacc
gtgattgtggtggagcacgatgaagacgccatccgcgccgccgaccacgtgatcgacatc
ggcccgggcgcgggcgtacacggcggtcaggtcgtcgcggaaggcccgcttgacgccatt
atggcggtgccggaatcgctcacgggccagttcatgagcggtaagcgcaagattgaagtg
ccgaaagagcgcgtgaaagccgatccggaaaaagtgctgaagctgaccggtgcgcgcggc
aacaacctcaaagacgttaccctgacgctgccggttgggctctttacctgcgtgactggc
gtttctggctccggtaaatcgacgcttatcaacgatacgctgttcccgattgcccagcgc
cagctcaacggcgcgacgatcgccgaaccggcaccgtatcgcgacgttcagggcatggaa
catttcgataaagttatcgatatcgatcaaagcccgattggccgcacgccacgctcgaac
ccggcgacctacacgggcgtctttacgccagtgcgtgaactgttcgcgggcgtgccggaa
gcgcgtgctcgcggctatacgccgggccgtttcagctttaacgtacgcggcggccgctgt
gaagcctgccagggcgatggcgttatcaaggttgagatgcacttcctgccggatatctac
gtgccgtgcgatcagtgcaaaggcaaacgctataaccgcgaaacgcttgagatcaaatat
aaaggcaagaccattcatgaagtgctggatatgaccatcgaagaagcgcgtgagtttttc
gacgcggtgccagcgctggcgcgtaagctgcaaacgctgatggacgttggtctgacttat
attcgtctcggccagtccgccaccacgctttccggtggtgaagcgcagcgcgtcaaactc
gcccgtgaactttcaaaacgcggcaccgggcagacgctctatattcttgatgagccaacc
accggtctgcacttcgcggatatccagcaactgctggcggtactgcatcagctgcgggat
cagggcaatacgatcgtggtgattgagcacaatctggatgttattaaaaccgccgactgg
atcgtcgatctgggcccggaaggcggcagcggcggcggcgagatcctcgtttccggcacg
ccggaaaccgtggcggagtgcgaagcctcgcataccgctcgcttcctgaaaccgcttctg
aagtaa
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