Clostridium tetani E88: CTC_00665
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Entry
CTC_00665 CDS
T00112
Name
(GenBank) RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
ctc
Clostridium tetani E88
Brite
KEGG Orthology (KO) [BR:
ctc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctc03021
]
CTC_00665
Transcription machinery [BR:
ctc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CTC_00665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Xre-like-HTH
HTH_24
UPF0122
Phage_antitermQ
HTH_AsnC-type
HTH_Mga
Sigma70_ECF
HTH_16
Motif
Other DBs
NCBI-ProteinID:
AAO35270
UniProt:
Q897R6
LinkDB
All DBs
Position
683258..683854
Genome browser
AA seq
198 aa
AA seq
DB search
MGEERQSGYLDEKYIYEIYLKDKSLALKMIIDEYKDFLYRFSFYLCKNSMESDDLFQDTW
VKVIKNIHKYTWNETFQPWIRTICLNTYKDKYRKSKRWLNIIKDYFDEEKKEREIINFPS
KNNLPEKETIKNEEKKILKKAVDNLKDEYRIPIILYYFERLSYKEISEIISIPEGTIKSR
LNKARKLLKEYVEVELNG
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
ttgggagaggagcgacaaagtggatacttagatgaaaaatatatatatgaaatatattta
aaagacaaaagtttagctttaaaaatgattatagatgaatataaagatttcctatataga
ttttccttttatttatgtaaaaactccatggaaagtgatgatttatttcaagatacttgg
gttaaagttataaaaaatatacataaatacacatggaatgaaacatttcaaccatggata
agaacaatatgtttaaatacctataaggataaatatagaaaatctaaaagatggcttaat
attattaaagattactttgatgaggaaaaaaaggaaagagaaataattaattttccttca
aaaaataatttgccagaaaaagagactataaaaaatgaagaaaagaaaattttaaaaaag
gcagtagataatttaaaagacgagtacagaattcctataatactatattattttgaaaga
cttagttataaagaaatatcagaaataatatctatacctgaaggcaccataaaatctaga
ttaaataaagctagaaagcttttaaaggaatatgtggaggtggagttaaatggatga
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