Chlorobaculum tepidum: CT1147
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Entry
CT1147 CDS
T00088
Symbol
sbcC
Name
(RefSeq) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cte
Chlorobaculum tepidum
Brite
KEGG Orthology (KO) [BR:
cte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cte03400
]
CT1147 (sbcC)
DNA repair and recombination proteins [BR:
cte03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CT1147 (sbcC)
Archaeal homologous recombinant proteins
CT1147 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_21
ABC_ATPase
AAA_15
nSTAND3
NTPase_1
AAA_22
Motif
Other DBs
NCBI-GeneID:
1006852
NCBI-ProteinID:
NP_662038
CyanoBase:
CT1147
UniProt:
Q8KDA7
LinkDB
All DBs
Position
complement(1073022..1076690)
Genome browser
AA seq
1222 aa
AA seq
DB search
MIIQKLRFANLNSLQGEWEIDFTRPEYLSDGLFAITGPTGSGKSTILDAICLGLYGQTPR
LGRITKSSNEIMARHSGDCFAEVTFATASGAYRCHWSQHRSRHKRGGELQSQKHEISDAV
TGALIQTKLQETLQEVEARTGMDFDRFTRSMLLAQGAFTAFLQADADQRAPVLEQITGTK
IYSVISMKVHERRRDELARLERLQLECEGIRLLGDEERRALETERAECIEKERELNAGVE
TESAAQRWLQEIARLEAALAAIGSEAAALDAEREAFRTDEERLRLARSAAAVEPQYAVLK
LKRAQLRRDSEELAAKEAGRPKMEQRWLEAEAQHEATEKALASAQESVTSARPLIAQVRQ
LDAVIEGKRQEAERRKRELEALEERRGRLDAERAAASASVESARNGLQKLRAWQTEHHAD
ASLVGALSGIRHAFDELHPAAERERAVASGIASVQQAIGQLRDEIAKIELESKASQAAFD
EARKALDERKASFTARLDGSTLKALRVELDLLRDRRHLLEEIVALYKSGKELLPKITELG
ANIETLESEEADATRKLEHARELLAHAEREAAAQENLARMADRVRSLEEERRRLVAGQPC
PLCGSEHHPYVEEQVLPESDEAALDVAKRAVQEYSRSVRELEISVAERRTEIEQMRQWRD
DLAAMRETSGRQCLALLEKAGVEAPAKEAEPVVLENLAENKRKVEELAGRIEQLDVLEQR
IRDDEARLQQLNEAARSDKRRLEQAVDQQRVNRFDLDRLEREREAAQCELAERRQLLRRL
VEPYGVAVGDEIAESLVAELEARRDAWRREEERGRSLEESLRIGEVSLRNVAEQIAALDA
DLAMRREEVEAAFAGVETSKKERRELFGEKLPDAEEERLESLVQAARDRLAASSERFNAA
RQALAVLDTSIAELRRAVEEEREEVERREAEFGAALAGKGFADEAAFVAACLPEAERERL
ESAATSLEHRKRDLDLKRSDREARLRDELERRLTTLSADELAVRIGELQAQLRDVQGRVG
AIASRLEAHRQAADEHRSKMAAVEAQKAECRRWEMLHSLIGSADGKKFRNFAQGITFEIM
IAHANKQLMRMTDRYVLLHDLSGALELSVIDQWQAGEVRSTRNLSGGESFIVSLALALGL
SQMSSRNVSVDSLFLDEGFGTLDEEALETALKTLGTLQQSGKLIGIISHVPALRDRIATH
IKVTPLTGGRSAIEGPGVSGPR
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
gtgattatccagaagcttcgtttcgccaatctgaattcgttgcaaggggagtgggagatc
gatttcacccggcccgaatatctttcggacggcctcttcgccatcaccggcccgaccggt
tcgggcaagagcaccattctcgacgccatctgcctcgggctctatggccagacgccgcgc
ctggggcggatcaccaaaagcagcaacgaaatcatggcgcgccactcgggcgactgcttc
gccgaagtgaccttcgcgaccgcctccggcgcgtaccgctgccactggagccagcatcgc
tcccgccacaaacgcggcggcgagttgcagtcccagaagcacgaaatctcggacgccgtg
actggcgcgctcatccagacaaaattgcaggagacgttgcaggaggtcgaggcgcgaacc
ggcatggacttcgatcgcttcacccgttcgatgctgctcgcgcagggcgcgttcacggcg
ttcctgcaagctgatgctgaccagcgcgcgccggtgcttgaacagatcacgggcacaaag
atttactcggtgatttcgatgaaggtgcacgagcggcggcgcgacgagctggcgcggctc
gaacggctccagctcgaatgcgagggcatccggctgctcggcgacgaggagcgccgagcg
ctcgaaaccgagcgtgcggagtgcatcgaaaaagagcgcgagctgaacgccggggtagaa
accgaatcggcggctcagcgctggttgcaggagattgcgcgtcttgaagcggcgctcgcg
gcaatcggcagtgaagcggcggcgctcgacgccgagcgcgaggcgttccgtacggacgag
gagcggctcaggctcgcccgcagcgccgccgccgtcgaaccgcagtacgccgttctcaag
ctgaaacgggcgcagttgcggcgcgacagcgaggaacttgccgcgaaagaggcggggcga
ccgaagatggagcaaagatggctggaggcggaagcgcagcacgaagccaccgaaaaagcg
ctcgcttcggcgcaggagagcgtcacctcagccaggccgctcatcgcgcaagtacgtcag
ctcgacgccgtgatcgagggcaagcggcaggaggccgagcggcggaaacgggagctggag
gcgctcgaagagcgtcgcgggcggctcgacgccgaacgtgcggcggcttcggcaagcgtt
gagtcggcgcggaacgggttgcaaaagcttcgcgcctggcagacggagcaccacgcggat
gcctcgcttgtcggtgcattgtcgggcatccggcacgccttcgacgagctgcacccggca
gcggagcgggagcgggccgttgcgtccggcatcgcatccgttcagcaagccatcggtcag
ttgcgggacgagatcgcgaaaatagagctggagtcgaaagcgtcgcaagccgcattcgac
gaggcccgcaaggcgctcgacgagcgcaaagcgtcgttcaccgcgcggctcgatggctcg
accctgaaagcgcttcgcgttgagctcgaccttctgcgcgaccgccgccacctgcttgag
gagattgtggcgctctacaagtccggcaaggagctgctgccgaaaatcactgaactcggt
gcgaatattgagacgcttgaaagcgaggaggctgacgccacccgaaagctcgaacacgcg
cgtgaactgctggctcatgctgaacgcgaggcggcggcgcaggagaatctcgctcggatg
gccgaccgggtgcgcagcctcgaagaggagcgtcgccgcctcgtcgccggtcagccctgc
cccttgtgcggctcggagcaccatccctatgttgaagaacaggtgctgccggagagcgac
gaagcggcgctcgacgtggcgaagcgagccgtgcaggagtattcgcgctcggttcgggag
ctggagatcagcgtcgccgagcgccggacggagatcgaacagatgcggcagtggcgcgac
gacctcgccgccatgcgcgaaacctccgggcggcagtgcctcgcgctgctcgaaaaggcg
ggtgtagaagccccggcgaaggaagcggagccggtcgtgctcgaaaatctcgcggagaac
aagcgcaaggttgaggagcttgccggacgcatcgagcagctcgacgtgctcgaacagcgg
attcgcgacgatgaggcccggttgcagcagctcaacgaagctgcgcgaagcgacaagcgg
cgtctcgaacaggccgtcgatcagcagcgcgtgaaccgcttcgacctcgaccgtctcgaa
cgcgagcgagaagcggcgcaatgtgaactcgccgagcggcggcaactcttgcgacgcctc
gtcgaaccgtacggtgttgcggttggcgacgaaattgccgagtcgctcgtcgcggagctg
gaggcgcggcgcgatgcatggcggcgcgaggaggagcggggccggagtctcgaagaatcc
ttgcggattggcgaggtgtcgctgcgcaatgtcgccgagcagattgcggcgctcgacgcc
gatctcgccatgcggcgcgaggaggtcgaagcggcattcgccggtgtcgagaccagcaaa
aaagagcggcgtgaattgttcggcgagaagttgcccgatgctgaagaggagcggctcgaa
agcctggtgcaggcggcgcgtgaccggcttgccgcttcgtcggaaaggttcaacgccgcg
cggcaggcgctcgccgtgctcgacacctcgatagccgaattgcgccgcgccgtcgaagag
gagcgcgaggaggtcgaacggcgcgaggcggagttcggtgcagcgcttgctggaaaggga
tttgccgacgaggcggcgtttgtcgccgcttgtctgccggaggccgagcgggagcggctc
gaaagcgccgcgacctcgctggagcatcgcaagcgcgacctcgacctcaagcgctccgac
cgcgaggcgcggctgcgcgacgaacttgaacgccgccttacgaccttatccgctgacgag
cttgcggtgcggattggcgagcttcaggcgcagcttcgcgacgtgcaaggccgcgtcggg
gctatcgcgagccggctcgaagcgcaccggcaggcagcggacgagcatcgctcgaaaatg
gcggcggtcgaagcgcagaaagcggagtgccgtcgctgggaaatgttgcacagcctcatc
gggtcggcggatggcaaaaagttccgcaacttcgcgcagggcatcacgtttgagatcatg
atcgctcacgccaacaagcagctcatgcgcatgaccgatcgctacgtgctcttgcacgac
ctgtcgggtgcgctcgaactcagcgtgatcgaccagtggcaggcgggcgaggtgcgctcc
acgcgcaatctctccggtggcgagagtttcatcgtcagcctcgcgctcgcgcttggcctg
tcgcagatgtcgagccggaacgtcagcgtcgattcgctctttctcgatgaagggttcggc
acgctcgacgaggaggcgctcgaaacagccctgaaaacgctcggcactctccagcagtct
ggcaagctgatcggcatcatttcgcacgtgcccgccctgcgggatcgcatcgccacgcac
atcaaagtcacgccgctcaccggaggccggagcgctatcgaaggacccggtgtcagcggc
cccaggtga
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integrated database retrieval system
