Clostridium thermosuccinogenes: CDO33_01215
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Entry
CDO33_01215 CDS
T05300
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
cthd
Clostridium thermosuccinogenes
Pathway
cthd00521
Streptomycin biosynthesis
cthd00523
Polyketide sugar unit biosynthesis
cthd00525
Acarbose and validamycin biosynthesis
cthd00541
O-Antigen nucleotide sugar biosynthesis
cthd01100
Metabolic pathways
cthd01110
Biosynthesis of secondary metabolites
cthd01250
Biosynthesis of nucleotide sugars
Module
cthd_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
cthd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CDO33_01215 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CDO33_01215 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CDO33_01215 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CDO33_01215 (rfbB)
00525 Acarbose and validamycin biosynthesis
CDO33_01215 (rfbB)
Enzymes [BR:
cthd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CDO33_01215 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
Sacchrp_dh_NADP
CBD_PlyG
NmrA
Motif
Other DBs
NCBI-ProteinID:
AUS95187
UniProt:
A0A2K2FD74
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All DBs
Position
276038..277069
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AA seq
343 aa
AA seq
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MKILITGGAGFIGGNFVHYILNKYPDYKILCLDKLTYAGNLETLKPVMDNPNFKFIKGDI
SDREFIYELFSEEKPDMVVNFAAESHVDRSIEDPGIFLKTNVIGTGVLMDACRKFGIKRY
HQVSTDEVYGDLPLERPDLFFTEETPIHASSPYSASKASADLLVQAYYRTYKLPVTISRC
SNNYGPYHFPEKLIPLIITRALADEELPVYGTGENVRDWLYVEDHCSAIDLILHKGREGE
VYNIGGHNERTNLQVVKTILKELGKPESLIRFVADRPGHDRRYAIDPTKIHNELGWLPAT
TFDEGIKKTIKWYLDNREWWQHILSGEYKDYFNKMYGNRLAES
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctaatcactggcggtgccgggttcattggcggcaacttcgtccattacatt
ttaaacaagtatcctgattacaaaatcctgtgcctggacaagctgacttatgccggcaat
ctggaaaccctgaagcctgtaatggacaatcctaatttcaaattcataaaaggtgacatt
tcagaccgggaatttatatatgaattgttttcggaagaaaaacccgacatggttgtaaat
tttgcagcggagagccatgtagaccgatccatagaggatcctgggatattccttaaaacc
aatgtgattggtacaggggtgcttatggatgcctgccggaagtttggcataaaaaggtac
catcaggtttccaccgatgaggtgtacggagatcttcccctagaaaggcctgaccttttc
tttactgaggagactcccattcatgcatcaagcccctactcagcgtcaaaagcatcggca
gatctgctggtgcaggcttactaccgcacctacaagctgccggttactatatcccgctgc
agcaataactacgggccataccattttcctgagaagcttataccactaatcattacccgt
gctctggctgatgaagagctgcctgtctatggaaccggagaaaatgtccgggattggctg
tatgtagaagaccactgctcggccatcgacctcatccttcataagggaagagagggagag
gtatataatataggcgggcataatgaacgcaccaatctccaagtggtaaagaccatcttg
aaagagttaggcaagccggaaagcctgatcagattcgtggcagatcgcccggggcatgac
cggcgttacgccattgacccgaccaagattcataatgaactgggatggctgccagccacc
acttttgatgaaggcatcaaaaagacaataaaatggtatctggacaacagggaatggtgg
cagcatattttaagcggcgagtataaagattattttaacaaaatgtatggaaacagactg
gctgaaagctag
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