Clostridium thermosuccinogenes: CDO33_06550
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Entry
CDO33_06550 CDS
T05300
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
cthd
Clostridium thermosuccinogenes
Pathway
cthd00300
Lysine biosynthesis
cthd00550
Peptidoglycan biosynthesis
cthd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cthd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CDO33_06550
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CDO33_06550
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cthd01011
]
CDO33_06550
Enzymes [BR:
cthd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
CDO33_06550
Peptidoglycan biosynthesis and degradation proteins [BR:
cthd01011
]
Precursor biosynthesis
Amino acid ligase
CDO33_06550
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF1611
Motif
Other DBs
NCBI-ProteinID:
AUS96126
UniProt:
A0A2K2FPK1
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Position
1526531..1527994
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AA seq
487 aa
AA seq
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MFLRDLVKGLKVLDVKGNLDIDISDIAYDSRKVKKGSLFVCIDGMTTDGHKYIPSALENG
AAALLVQKDVTVEDGVTVVKIEDTRFGLAFVSDAFFGHPSQKLHLIGVTGTKGKTTTTYM
IKSILEHSGQKVGLVGTIANMIGDEVLYAQRTTPESYDLQSLFEEMLEKGVTSATMEVSS
QGLALDRVGCCDFDIGIFTNITSDHIGPREHKDFDDYLEAKAKLFRMCKKGVINIDDPHA
QRIMEKAECEITTFGIEKDADIKAYDVVKHSTGVDFKITSPWGNEPISVSIPGKFNVYNA
LAAIGACALSGISMESIKAGLANVKVKGRAEVVETGRDFTVMIDYAHNAISLENILTTIK
DYAPGRVVCLFGCGGDRDKARRFEMGEVSGRLADFTIITSDNPRTEDPDAIINDIETGIK
RTTGKYIKITERREAIKYAIDNAQPKDIILLAGKGHETYQEFKDKTIHFDEREVVAEILE
KKQAAGC
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtttctcagagatttggtaaagggattgaaggtattggatgtaaaaggcaatttggat
attgatatcagcgatattgcgtatgattccagaaaggtaaaaaaaggttccctttttgta
tgcatagatggcatgactaccgatggacataaatacataccgtcggctctggaaaacgga
gcagccgctcttctcgttcaaaaggatgtgacggtagaagacggtgtcaccgtggtgaag
atagaggatacccgatttggactagcattcgtgtccgacgctttctttggccatccttcc
caaaaactgcatttgatcggggtcaccggtacaaagggaaaaactaccaccacatatatg
attaagtcgatacttgagcattccggacagaaggtggggttagtaggaactattgccaac
atgattggtgatgaagtcctgtatgcccagagaactacacctgagtcctatgatctccag
tcgctttttgaagagatgctggaaaagggcgtgacaagcgcaaccatggaagtttcatcc
caaggactggctctggacagagtgggatgctgcgactttgatattggaatattcaccaac
ataaccagtgatcacataggacccagagagcacaaggactttgatgattatcttgaagca
aaggccaagcttttccgcatgtgcaaaaaaggagtcataaacatcgacgatccccatgcc
cagaggatcatggaaaaggcagaatgtgaaataaccacctttggcatagaaaaggatgcg
gatatcaaggcatatgatgtggtaaagcactccaccggagtggattttaaaatcacttcc
ccatggggaaatgagcccatcagcgtcagcataccgggtaaattcaatgtatataatgct
ctggcagctattggagcatgtgccctttcaggaatttccatggaaagcataaaagctggc
ctggccaatgtcaaggttaaaggcagggctgaagtggtggaaacaggaagagactttaca
gtcatgattgattatgcccataacgccataagccttgaaaatatactgacgaccataaaa
gattatgctcccggaagggtagtttgcctgtttggatgcggcggagacagagacaaggcc
agaaggtttgaaatgggagaggtttcgggcaggcttgccgattttactattataacatcg
gacaatccacgcacggaggacccggatgcgattataaatgatattgagaccggaatcaaa
agaactacaggaaagtacataaaaattaccgaacgccgtgaggccatcaagtatgcgata
gataatgcacagccaaaagatattatactgctggcaggtaaaggtcatgaaacctaccag
gagtttaaggataagaccattcattttgatgaaagggaagtagttgcagaaatactggag
aagaaacaggcagccggctgttga
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