Clostridium thermosuccinogenes: CDO33_07840
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Entry
CDO33_07840 CDS
T05300
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
cthd
Clostridium thermosuccinogenes
Pathway
cthd02020
Two-component system
cthd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cthd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CDO33_07840
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CDO33_07840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cthd03021
]
CDO33_07840
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
cthd02035
]
CDO33_07840
Transcription machinery [BR:
cthd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CDO33_07840
Bacterial motility proteins [BR:
cthd02035
]
Flagellar system
Flagellar assembly proteins
Stator
CDO33_07840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
HTH_5
Sigma70_ECF
DUF1492
Motif
Other DBs
NCBI-ProteinID:
AUS96353
UniProt:
A0A2K2FPG7
LinkDB
All DBs
Position
1795049..1795819
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AA seq
256 aa
AA seq
DB search
MSSNNKQMELWKEYSSTKDPSIREKLILEYSHLVKFIAGRLSIYFGANVEYDDLVGFGIF
GLIDAIEKFDVKKGVKFETYASLRIRGSIIDSMRELDWVPRSLRQKSKEMEKVYAELENE
LGRSATDQEVADRLGITTDELSKRLNDVNVSSMVSLEEFLEQNYEIGVDVPNVNKDDLPE
DYIEAAELSEILGNAIDKLPEKEKIVVSLYYFEELTLKEISAIMKVSESRVSQLHTKAIL
RLKGKLARYKSSLDNN
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctaataataagcaaatggagctgtggaaagaatacagcagcactaaggatcct
tctatcagagaaaagctgattcttgaatattcgcacctggtcaagtttattgctggaaga
ttgagcatttatttcggagcgaatgttgaatatgacgatctggtgggatttggcatattt
ggcttgattgacgcgatagagaaatttgatgtaaaaaaaggagtcaaatttgaaacatat
gcttctttaagaataagaggatcaataatagacagcatgagggaattggattgggtaccc
agatcattaagacaaaaaagcaaagagatggagaaggtatatgcggagctggaaaatgaa
ttagggcgttccgctacagatcaggaagttgcggacaggctgggaattaccacggatgaa
ttgagtaagaggttgaatgatgtaaatgtttcatccatggtttccttggaagagtttttg
gagcaaaactatgaaatcggagtggatgtgcccaatgtaaacaaggatgatttgccagaa
gattacatagaagcagctgagcttagcgaaattcttggaaatgcgatagataaactgccg
gaaaaggaaaaaatagtggtctctttgtactattttgaagaattgacattaaaggaaata
agtgcaataatgaaggtatcagagtccagggtatcccaactgcatacaaaagctatcctc
aggttgaagggaaaattggccaggtataagtcgtcactagataataattga
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