KEGG   Chaetomium thermophilum: CTHT_0019090Help
Entry
CTHT_0019090      CDS       T03100                                 

Definition
(RefSeq) DNA ligase-like protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
cthr  Chaetomium thermophilum
Pathway
cthr03030  DNA replication
cthr03410  Base excision repair
cthr03420  Nucleotide excision repair
cthr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cthr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CTHT_0019090
   03410 Base excision repair
    CTHT_0019090
   03420 Nucleotide excision repair
    CTHT_0019090
   03430 Mismatch repair
    CTHT_0019090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cthr03032]
    CTHT_0019090
   03400 DNA repair and recombination proteins [BR:cthr03400]
    CTHT_0019090
Enzymes [BR:cthr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CTHT_0019090
    6.5.1.6  DNA ligase (ATP or NAD+)
     CTHT_0019090
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     CTHT_0019090
DNA replication proteins [BR:cthr03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    CTHT_0019090
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     CTHT_0019090
DNA repair and recombination proteins [BR:cthr03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     CTHT_0019090
   NER (nucleotide excision repair)
    Other NER factors
     CTHT_0019090
   MMR (mismatch exicision repair)
    Other MMR factors
     CTHT_0019090
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Motif
Other DBs
NCBI-GeneID: 18255947
NCBI-ProteinID: XP_006692398
UniProt: G0S2Z6
LinkDB All DBs
Position
Unknown
AA seq 837 aa AA seqDB search
MPPKKRKLNNASEGSTPARTLDYFFGKQNQKSSPRPSSTPDPTLPSTQIDQTDQILTDEK
LAQKLQAEFDAEARVFSASQQPPEPVQPQVTSPKKSAQADAAPDTTKLSTPKPTVAQNIL
SLSATPSSDDPLVASLPLDENPLTFAPSKCLPGLLPSWTSESGAPYALLTRCFTLVNNTQ
SRIKIVDTLTNTLRLLIEGDPDSLLPAVWLSTNAIAPPWVQGMELGIGGAAISKALKTAC
GLDNRALKALYDKVGDAGDVAFEAKKKGGFTFRKPKPLTIKGVYQSLVKIAKAQGPGSGE
TKQRIVDRLLQDARGGEESRAFLLSIPPNASYNVPYTQEELRKLKKDSLAAIYAKTETLL
KTLFARHPDYNALIPALLNHGISSADILLEKCGLTLHTPLRPMLGSITRDLAEVLSRLEG
RAFACEYKYDGQRAQVHCSSDGHVSIYSRHLENITGQYPDLVALIPQIKEDEVEGFILEG
EVVAVDKVTGALMPFQTLAGRGRKDVDLSKVKVDVCLFAFDLMYLNGKALLEEPFRRRRE
LLRTKFKEVPGKFTWVKSQDATSEDAEAIQEFFKKAVEDKCEGIMVKLLDPEPGADLTNA
ALGNDEDPALPDPDSTPSPSKKGSKPSLAEKKPRRKPLLSTYQPDKRLESWLKVKKDYTA
SHSDTLDLVPIAAWHGQGRKARWWSPILLAVRNDETGALEAVCKCMSGFTDAFYRAMREF
YDDGEVTGERKNTHPRRPGWIEYSGPEPDVWFEPCEVWEVAFADVTVSPTYTAGMGMAVE
DRGLSLRFPRFLRKREDKGVEEASSSEVLVRIWRKQMDRGNGKRHREEAEGVEIEEE
NT seq 2514 nt NT seq  +upstreamnt  +downstreamnt
atgccgccaaagaagcgaaagttgaacaatgcatccgagggttcgactccagctcgaact
cttgattactttttcggaaagcagaatcagaaaagctccccaagaccatcctcaacaccg
gacccgacgctaccgtcaacccagattgatcagacagatcagatcttgaccgatgaaaag
cttgctcaaaagctccaggccgagttcgacgccgaagcgagggttttctctgcaagccaa
caacctcctgagccagtccaacctcaagttactagtcccaagaagtctgcgcaggctgat
gcagcaccagataccacaaaattatcaacacctaagccaaccgttgctcagaatatcctg
tctctctccgcaacaccatcctcggatgatccactcgtcgcttcccttccgctcgacgag
aatcccctgactttcgcgccatccaagtgtttgccaggccttcttccctcttggacatcc
gaatctggggctccctacgccctcctaacacggtgcttcactcttgtcaacaacactcaa
tctcgcatcaagattgttgacaccctaaccaacaccctccgactgctcatcgaaggagac
ccagacagccttctccctgcagtatggctctctaccaacgccatcgcacctccttgggtc
cagggtatggagctcggcatcggcggggcggcaatatccaaagcgctgaaaacggcttgt
ggattggataacagggcgctgaaggcactgtatgataaggtcggcgatgcgggagacgtg
gcctttgaagccaagaaaaaggggggctttacctttcggaaaccaaagcctttgactatt
aagggcgtctatcaaagtttggtgaagatcgcgaaagctcaggggccagggagcggagaa
accaagcagagaattgtcgatcggttgttgcaggatgctaggggtggtgaggagagtcga
gctttcttgctctccatccctccaaatgcttcatacaacgtcccgtatactcaagaagag
cttcgcaaactcaaaaaggactctcttgccgctatctatgccaaaactgagaccttgctc
aagaccctcttcgcgcgtcatccagactataatgccctgataccagccctcttaaaccat
gggatctcctctgccgacatcttgctggagaaatgtggacttactctgcacacacctctt
cgccctatgctggggagcattacccgtgacttggctgaagttctttcacggctggaaggt
cgtgcctttgcttgtgaatacaagtatgatggacaacgagcacaggttcattgttcatct
gatggccatgtgtccatatactctcgccacttggagaacatcacgggacaatatcccgat
ctggtagctctcatcccacaaatcaaagaggatgaagtggagggcttcatcctcgagggc
gaagttgtcgccgttgacaaggtgacaggggcattgatgccatttcagacgctcgcaggt
cgcgggaggaaagatgttgacctgagcaaggtgaaggttgatgtctgtttgttcgccttt
gatctcatgtatctgaatggaaaggcgttgttggaagagccctttcgtcgcaggagggag
cttctgaggaccaaattcaaggaagtccctgggaagttcacctgggttaagagccaggat
gcgacaagcgaagacgcagaagcaatccaagaattctttaagaaagctgtcgaggacaaa
tgcgaaggaatcatggtcaagctactagaccctgagcccggtgccgacctcaccaacgca
gcccttggcaacgacgaggacccagccctgcctgatcccgactcaaccccctccccaagc
aagaaaggctccaagccctccctcgccgaaaagaagccccgccgcaagcccctcctctca
acctaccaacccgacaagcgccttgagtcctggctcaaagtcaaaaaagactataccgcc
tcgcactccgacacccttgacctcgtcccgatcgcagcctggcatgggcagggccgcaaa
gcccgctggtggtcgcccatcctgctcgcagtccggaacgacgagactggcgccctcgag
gcggtctgtaagtgcatgtctggatttactgacgcgttctacagagccatgcgggagttt
tatgatgatggggaggttacaggcgagaggaagaatactcatccccggaggccgggatgg
atcgagtacagcgggccagagccggatgtgtggtttgagccgtgcgaggtgtgggaggtg
gcgtttgctgatgtgactgttagtccaacgtatacggcggggatggggatggcggtggag
gacagagggttgagtttgcggtttccgaggtttttgaggaagagggaggataaaggggtt
gaggaggcgagttcaagtgaggtgctcgtgaggatatggagaaagcagatggatcggggg
aatgggaagagacatagggaggaagcagagggagtagagattgaggaagagtaa

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