Thermochaetoides thermophila: CTHT_0020070
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Entry
CTHT_0020070 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K11771
SWI/SNF chromatin-remodeling complex subunit SWI1
Organism
cthr
Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cthr03021
]
CTHT_0020070
03036 Chromosome and associated proteins [BR:
cthr03036
]
CTHT_0020070
Transcription machinery [BR:
cthr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
CTHT_0020070
Chromosome and associated proteins [BR:
cthr03036
]
Eukaryotic type
Chromatin remodeling factors
SWI/SNF complex
CTHT_0020070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
MADF_DNA_bdg
Motif
Other DBs
NCBI-GeneID:
18256045
NCBI-ProteinID:
XP_006692487
UniProt:
G0S385
LinkDB
All DBs
Position
Unknown
AA seq
1240 aa
AA seq
DB search
MNSSWISDSAAVPSAVPNHNGNGFPQLSDPSAVAAGNMMDPSAFMANPAQFNAQFANPQQ
IVMQPNGPGPGAGPSAPGAPGGPAGPAGPMRNASPSFPNPMYQTNSVVPSKRPRPREDGM
AQSPRPAPGMLPTSRAETPQQSGFQGFQQPPITQPPSTQPSPYPHLQTNGSTNATPSPIM
ANQMRPGSVPQRVASSSPHPFSPAAQQFPQTPSMPSEHGGTPQPFMQQNAFQQNFNPQFA
PGQSPARPSPTPNPIAGQMMPQQMGQVPGQMPGQMPGQMAGQIPGQMAGQMPGQMPGQMP
GQMPGQMPGQMPGQMPGQMGQLPQQMQMAGQIPGQIPGQMPGQLPGQMMPGQLPGQMPGQ
LPGQVPGQIPGQLPGQMPGQMPGQMPVQLPGQMPGQMPGQMVGQVPNIMLQQQLAQARNP
LEQQKILYQMQLQQQQLQRASIQMQQMAAGQNMMQAQPGPNQAQAQARNMMAAAPRPGMP
NGQIPPGAMRPQPGMAPQPLRAPPPDQFMKHLTTFMSSKVLPFEMNPVIEGRQISLYNLF
AIVYTKAGGYRSVTQNNAWVQVAQAMGFQPSQLPSAAQQLRAAYERNLVRFEEVWTTQQK
MRMQQQGAMGHPQAMGQATPTKMMPGGQMPPQMMQPVAQSQLQQGLQPGQVQSPVKPPGA
QHPNGFPAGQPVPGQQSMLASQGHVRNNLSRTMSTPTAEGFPMPSPAQSKAGTESLPGST
HPESHGIPEQDVVLKISTPFHTNPEEYVPCSQKLTTYGGHELNALWKIGEELQRSKIDVP
SPLELGNVDIHALTKSIQSGIHGEVRVALDTLAILTHKDHHWVAPNHPFPVPQIDLRHCE
ELVEALIECAEEQLDLLVENSEETSDEITVPSYEDIVRNCKIEKFGLQNVTMLGTSDHDL
NRAVDRLICITTILRNFSCHEENHGPLADETVVKFICVVIRYLGTREMLMRTYNDTLDLM
KDLVTLLSNIAPAIEIPGREQAFCLLQFLLAFVPQPGPTWSDGRLFFPSYEPALHPYLPH
AVDCLAKLLARDEPNRTYYKTIFAAEPALSTDPPCELLTRTFALAIAPIPDHTRDHRHPM
PSLVDVRKPILMQGLLAADIMAGLAPGADSGVTRAWLASGDGFAQNLFLLTRQLSAQFET
GTIVQTRPPPGSRGVPSQPTVKRDMDLLYIIGLAISMLRKLCEKARDPSDPALGGIPPNV
IPPKESVLGALQMQAQEWGKPGLLADLLALESMAEEVVSV
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgaactcctcttggatcagcgactccgccgcagtcccctccgcagtccccaatcacaat
ggcaacggcttcccccagctcagcgatccatctgctgtcgccgccggcaacatgatggac
ccgtccgctttcatggccaacccagcccagttcaacgcgcagttcgcgaacccgcaacag
atcgtcatgcagcccaacgggcccggtcctggtgccggtcctagtgctcccggcgctcct
ggaggccctgctggccccgcagggcccatgcgaaatgcgtcaccctcgttcccgaacccc
atgtaccagacgaactcggtcgtgccgtcgaagcggccccgcccgcgagaggatggcatg
gcccagtcgccgcgcccggcacctggcatgctaccgacttcgcgcgcagagacaccgcag
cagtccggctttcagggcttccagcagccgcccataactcagccgccgtctactcaacca
tctccataccctcatctccagaccaatggctcgacgaatgcgacaccctctcccatcatg
gcgaaccagatgcgtcctggtagcgttccccagcgcgtcgcatcctcgtctccccatcca
ttctctcccgccgcgcagcaatttccccagaccccatcgatgccatcggaacatggcggt
acgccgcagccgttcatgcaacagaacgcattccagcaaaacttcaacccgcaattcgcg
cccggtcagtctcctgcgcgtccttctccgactccaaacccgatcgctggccagatgatg
ccacaacagatgggccaggtgccagggcaaatgccaggtcaaatgcctggccagatggca
ggtcagatacctggccaaatggccggtcaaatgcctggtcaaatgcctggtcaaatgcct
ggtcaaatgcctggtcaaatgcctggccaaatgccaggacagatgccaggccagatgggc
cagttgccgcaacaaatgcagatggcaggtcaaatacctggacagattcccggccagatg
cccggccagctaccggggcagatgatgcccggacagttgcctggtcagatgccggggcaa
cttcctggccaggtacccggacagatcccaggacagttacccggacagatgccgggccag
atgcctggacagatgccagtccagcttcccgggcagatgccaggtcaaatgccgggtcag
atggttggtcaggtgccgaacattatgctccagcagcaattggctcaggctcggaatccg
ttggagcagcagaagattttgtaccaaatgcagttgcagcagcagcagctgcagcgagct
agtatccagatgcaacagatggctgcaggccagaacatgatgcaagcgcagccaggcccg
aaccaggcacaagcgcaagctcgcaacatgatggccgccgctccgagacccggcatgccg
aatggccaaatcccgccaggcgctatgaggccgcaacctggcatggctcctcagcctctg
agagcacctccgccggatcaattcatgaaacatctgacgactttcatgagctctaaggtt
ctcccgttcgagatgaatccggtcattgaaggtcgccagatttccctctacaacctattt
gctatcgtttatacaaaggctggcggttatcgcagtgtgacgcagaacaatgcctgggtt
caagtggctcaggcaatgggcttccagccttcgcagctgccgtccgcggcccaacagctc
agagcagcatacgagaggaatctggtcaggtttgaggaggtctggaccacgcagcagaag
atgcgcatgcagcaacaaggagccatgggacatccgcaagctatggggcaagctacacca
accaagatgatgcctggcgggcaaatgccgccacagatgatgcagcctgtcgcccaatcg
caactccagcaaggactccagccaggtcaagttcagtcgcctgtaaagccgccgggtgct
cagcatcccaatggtttcccagccggtcagcctgtgccaggccaacagtcgatgcttgcc
agccaaggacacgtgcgcaacaacttatcgcggactatgtcaacgcctactgccgagggg
ttccccatgccatctccagcacagagcaaggcagggaccgaatcactgcctggatcaacg
catcctgaaagccatggtatacctgaacaggacgttgtgttgaagatatccacgccgttt
cacaccaatccggaggaatatgttccctgctctcagaagttgacgacgtatggcggccac
gaactcaacgctttgtggaagatcggcgaggagctacagaggtcaaagatcgatgttccg
tcgccgcttgagctgggcaatgtcgatatccacgcccttaccaagagcatccagagtggt
atccacggcgaagtgcgcgttgctctcgacacactggccatccttacccacaaagatcac
cactgggtcgcaccgaaccacccattccccgttcctcagatcgacttacggcattgcgaa
gagctggtcgaggccttaatagaatgtgctgaggagcagctcgacctgcttgtcgagaac
tcggaagagacgtcagacgagatcacggtcccgtcttacgaggacattgtgcgcaattgc
aagatcgagaagttcggcttacaaaacgtcacgatgctcggcaccagcgaccacgatctc
aaccgggccgttgatcggcttatctgcatcacgactatccttcgtaacttctcgtgccac
gaggagaatcatgggccacttgccgacgagactgttgttaagttcatttgcgtcgtcatt
cggtacctgggcacccgtgagatgcttatgcgtacatacaacgacactttggatctcatg
aaggacctggttactcttctatcaaacatcgcccctgcaatcgagattcccggtcgggag
caggctttctgcttgcttcagttccttcttgccttcgtcccacagcccggcccaacttgg
tcagatggccggcttttcttcccttcttacgagcccgccttgcatccttaccttcctcat
gcagtcgattgccttgccaaacttcttgcccgcgacgagccgaacaggacatactacaag
accatattcgccgccgagcctgccctttccacagatcctccctgcgagctcctcactcgg
acattcgcccttgctatcgcccctatcccagaccatactcgtgaccatcgccatccgatg
cccagtttggtcgatgttcgcaagccaatccttatgcaaggcttgctcgcagccgatatc
atggccggtctggcgcccggcgccgacagcggtgttactcgggcatggcttgcctcaggc
gatggcttcgcccaaaatctgttcctgctaaccagacagctcagtgcgcaattcgaaacg
ggcacgatagtccaaactcggcctcctcccgggtcaagaggcgtcccttcccagcctact
gtcaagagggatatggatttgctgtatatcattggtctggcgattagcatgctcaggaag
ctttgcgaaaaggccagggatccctcagatccggctttgggcggcattccgccgaacgtc
atcccgccgaaggagagtgtcctcggtgccctgcagatgcaggctcaggaatggggtaaa
ccaggtttgctggcggatttgttggctttggagagcatggcggaagaagtggtttccgtt
tga
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integrated database retrieval system
