Thermochaetoides thermophila: CTHT_0054650
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Entry
CTHT_0054650 CDS
T03100
Name
(RefSeq) putative nuclear pore complex protein
KO
K18715
nucleoporin NUP159
Organism
cthr
Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cthr03019
]
CTHT_0054650
Messenger RNA biogenesis [BR:
cthr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CTHT_0054650
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP214
ANAPC4_WD40
WD40
Na_trans_assoc
Prothymosin
Nop14
Motif
Other DBs
NCBI-GeneID:
18259503
NCBI-ProteinID:
XP_006695799
UniProt:
G0SBS8
Structure
PDB
LinkDB
All DBs
Position
Unknown
AA seq
1481 aa
AA seq
DB search
MAFSFGNAGGGGGGVTQGKDLEVIQTEGLGFLALAGDAKVQLTSKWSPPPAPTASLLSIA
SRKGLVAAAGPDAVHVATTESVRKAFLAEKNGDSEVRPFNPEAKLPLPLRISQLAFTADE
QYLVLSAETGGGLRAYDVNSLTQGNTQSAFELATNGETLRQLAPNPMPESAAFCAIVTTN
GNLYMANLAERTLVSGPNGPTLRSQVSCAAWSTKGKQLVAGMADGSIYQMTPDGTEKAHI
PKPPNLGDYHVSSVVWLENNVFLTIHNPTNSTNPDDKTVYHVITRQQSSGSPPNFTFQKL
NDPVEPFVADKTPHHTVLRLKDFPPNLQDLLLVSSTAVETIGLLTRSKTPLATDKPADAI
TNVFTTTELADDSRRAQLPMSEDMMETYPIGVALDLSSKEKVYKPIPTDEEIEYSPGPLP
GLWVLNNEGVLASWWVVYNESIRAGTTYSGIGGSSEVIPASPAPALASSTAPVPAFASPV
SKPTFGSPSPATPAFGGPSALGTKASPWATAGGAASSTPTFGQPSFGKPAAPAFGQASFP
GLGQKVSPWATGSTTSAAPAFGQSGFASAGTAPGKVFGSSFTAPSSGGFASFATKSGFAS
LSAPSGGSSIFSSKPGAPLTSAAPEVSMDTDTAFPPPSTKTDKPAFGSSPFVLGSTFKAD
PTAAHDIEKPKEGESKSLFDTGFGLSLEDAAKQPASAAESKDEEMRSTTPPLPPPTETKP
KSIFESTTPTTTPAPQKFEFKTTTPSGFSTLLGSTKPVASSMPNIFATPKPTSAEKPKSI
FDTLKPKEESKENLLKASEPPLPPDTTSKAVFQPGSSSSESAESSPGAAAKAAFKVGNDE
TPKPQKELAPKPEAVPLPPDFVKAKPKTEAKETKAEEPAVSPNLPVKPLAKKAEPIPAVP
ESASEEEQGQAEEEEAESGEEEEEEEEEGEGEEEEEEEEEEEEEEEEGEEGEEQSEAGSE
GSGVDVAKDLSPTAKFGSMTPGYTPHTSLGGMAESTFSTISRSEVAEQSRPLFGEITKNA
PPLFPAAGPLPVSPRSPSPVRGVVRSSILRPTETPRPVDTTPVPSRKGLLQKTASFGMST
GQKPAVDPNVKAQRKLAEKLKAEEQVLVDPEDEGIQQILQSKVEPTLRMNEFLAVDTKLA
PMKPGRDDVPNACETLWRDINRMIDRLGLNSRSLQSFILGHTSHGKPGGRQKDDLEKPDD
WVLIEAYDLGDMIDNKLARELEAGRIKDVEGTMAAIHNLGRDLAKLRAKEEDLRKLFNAQ
VDPDQIALTKALPLSAEQLAQQNELRRSYASFSKLLTEAEEALTVLKAKLASANAARGRR
GAGAAQVPTVDAIIRTINKMTSMAEKRSGDIDVLESQMRKLRIGSLGPAGTPNGNGVGAG
TVVPATPGGGGRSRESSPFVTPQSSRRAMFMSPGSVGTATPRGLLAATGTPSPTKKKLSM
YTAEEKRELRAREAKRKATLRMLRESLARVGPNVVRLRDDD
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atggcttttagctttggaaatgccggagggggcggcggcggcgtgacgcagggcaaggac
cttgaggtcatacagacagagggtcttggatttctcgctctcgctggcgacgcgaaagtc
cagctgacctcaaagtggtctcccccgccggcaccgaccgcgtccctgctcagcatcgct
tctcgcaagggcctagttgctgccgctggccccgatgctgtccacgtcgccacaaccgag
tcggtgcggaaggccttcctggccgagaagaacggggatagcgaagtgcggccgttcaac
cccgaggcgaagcttccgctgccgcttcgcatctcgcagctggccttcacagctgacgaa
caatatctcgtcctttctgccgagacgggcggtggtcttagagcatacgatgtcaactcg
ctcactcagggaaacacccagtctgcttttgagctcgccaccaacggcgaaaccctgcgc
cagctggcccccaaccccatgcctgagtcggccgctttctgtgccattgtcacgaccaat
ggcaatctctacatggcgaatctagccgagaggacgctcgtctcggggccgaatgggccg
accctgcgttcccaggtcagctgcgccgcctggagcaccaagggcaagcagctcgttgct
ggcatggcggacggttctatttaccagatgacgcctgatggtacggagaaggcccacatt
cccaagccgcctaatctcggcgactaccatgtctcctcagtggtgtggctagagaacaac
gtgtttctcactatccacaacccaaccaattcgaccaaccccgacgacaagaccgtctac
cacgtcattaccaggcaacagtcgtcaggcagcccccccaactttaccttccagaagctg
aacgatcccgtcgagccattcgttgccgacaagactccccatcacaccgttctgcgactg
aaggacttcccgcctaacctccaggacctgctcttggtttcgtcgactgccgtcgagact
atcggcttgctcacccggtccaagacacccttggcgactgacaagccggcagacgccatc
accaatgtcttcacaactaccgaattggctgacgactctcggcgcgcgcagctgccgatg
agtgaggatatgatggagacttaccctattggcgtcgcgcttgatctgtccagcaaggag
aaggtctacaagccgattccgacagatgaagaaattgagtattcccctggccctcttcct
ggcttatgggtgctcaacaacgagggcgtcttggcatcgtggtgggttgtatacaacgag
tcgattcgcgcggggacaacgtattcaggaattggcggcagcagcgaagtcattcctgcg
tctccagccccagcgctcgcatcctcgacagcccctgtgccggcgttcgcgtcgcccgtt
agcaagcctacattcgggtccccgagtccggctacaccggcctttggaggtccgtcggcc
ttgggaaccaaggcttcaccgtgggccaccgctggaggcgccgcgtcgtccacgccgaca
ttcggccagcctagttttggcaagccggcagcgcccgcatttggccaagcttcgttcccc
ggcttggggcagaaggtttctccgtgggccacaggttcgacgaccagcgcggcaccggcg
ttcggacagtccggcttcgcaagtgctggcacggcccctggaaaggtgtttggcagcagt
ttcaccgccccgtcttcgggagggttcgccagctttgctaccaagagcggttttgcttca
cttagcgctccctcaggcggttctagcatcttcagttctaagcctggtgcaccactgact
tctgctgctcccgaagtgtcgatggacaccgacacagccttcccccctccgagcacgaag
accgacaagcccgcttttgggtcgtcgccatttgtcctgggaagcacgttcaaagcggat
cccacggccgctcatgatattgagaaaccgaaagaaggcgagagcaagtccctcttcgac
actgggtttggcctctcgcttgaggatgcggccaagcagcctgctagcgccgccgaatcg
aaagatgaggagatgcggtctactacacctcctcttcctccgccgactgagacgaagccc
aagtcgatctttgagtcgacgacccctacgactactccggcacctcaaaagttcgaattc
aagacgacgacgccatctggattctcaactctgctcggcagcaccaagccggtagcctcg
agcatgcccaacatttttgctacgcctaagccgacttctgcggagaaaccgaagtctatc
ttcgatacactcaaacccaaggaggagagtaaggagaatcttctcaaggcttccgagcca
ccacttcctccagacaccactagtaaggcggtctttcaaccgggttcttcatcttctgag
tcagcagaaagctcacctggagcagcagcgaaggcggcgttcaaggtgggcaatgatgag
accccgaagccccagaaagagctagctccgaaacctgaagcggtgccgttgccaccggac
tttgttaaggccaagccgaagactgaagccaaggaaaccaaggctgaagagcctgctgtt
tcccctaatctcccagtcaaaccgctagcaaagaaggcggagcccatccctgcagttcct
gaaagcgcctctgaagaagaacaggggcaggcagaagaagaggaagctgaatcaggagaa
gaagaagaagaagaagaagaagaaggagagggtgaggaggaagaggaggaagaggaggag
gaggaggaggaggaggaggaaggagaagaaggtgaggagcagtcagaagctggcagcgaa
ggcagcggtgttgacgttgcgaaagacctcagcccaacagccaagtttggcagcatgacg
cctggctacacgccacacacctcgcttggcgggatggctgaaagcacattctcgactatc
tcccgctccgaagtagcagagcagtcgcggccattgttcggagagatcactaagaatgcc
cctcccctgttccctgcggctggcccgttacccgtgagtcctcggtcgcccagcccggtc
cgtggcgtagttaggagcagcatattgagaccgaccgagactcctcggcccgttgacacc
acaccggtaccgtcacgaaagggcctgctccagaagactgctagttttggtatgtcgaca
ggtcagaagcctgcagtcgaccctaatgtcaaggcccagcgcaagctggctgaaaagctc
aaggcagaggagcaggtgctcgtggacccggaggacgagggtattcagcagatcttgcag
tctaaggtcgagccgaccctacgaatgaacgagtttcttgccgtcgacacaaaacttgcg
ccgatgaagcctggccgtgacgatgtgcccaacgcctgcgagacactctggcgcgacatt
aatcgcatgattgaccgtctgggcctcaactcgcgctcgctgcagtccttcatcctgggt
cacacttcacacggtaagccgggcggcaggcaaaaggatgaccttgagaagccggatgac
tgggttctgatcgaagcatacgaccttggtgatatgattgacaacaaacttgcgcgggag
ctcgaagccggtcgcatcaaggacgttgaaggcactatggccgcaatccacaaccttggg
cgagacctcgccaagttgcgcgccaaggaggaggatttgcgtaaactcttcaatgcgcag
gtcgacccggatcagatcgctctgaccaaggccttgccgctgagcgcggagcagctggcg
caacagaacgagctgcgccgttcgtacgcctccttctccaagctgcttaccgaggctgag
gaagcgctcaccgtactcaaggccaagcttgcgtcagcaaatgcggcgcgcggccgtcgt
ggcgctggcgccgctcaggtaccaacggtcgatgctattattcgtaccatcaacaagatg
accagcatggcagagaagagatcgggcgatattgatgtgctcgagagccagatgcgcaag
ctgaggatcgggtctctggggccagctggtactccgaatgggaatggcgttggcgcgggc
acagttgtccccgctacccctggtggcggtggtcgtagtcgcgaaagctcgccgtttgtc
acaccccaatcgtcgcggcgggcaatgttcatgtcgcccgggtctgtgggcacggcgacg
ccacgtggtctacttgctgccactgggacaccgtcgccgacgaagaaaaaactgagcatg
tacaccgcggaggagaagagggagctgagggcacgcgaggcgaagaggaaggcgacattg
agaatgctaagagagagccttgctagagtgggtccgaatgttgtgcgattgcgggatgat
gattag
DBGET
integrated database retrieval system
