Thermochaetoides thermophila: CTHT_0066350
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Entry
CTHT_0066350 CDS
T03100
Name
(RefSeq) DNA polymerase-like protein
KO
K10981
DNA polymerase IV [EC:
2.7.7.7
]
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CTHT_0066350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cthr03400
]
CTHT_0066350
Enzymes [BR:
cthr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CTHT_0066350
DNA repair and recombination proteins [BR:
cthr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
CTHT_0066350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_lambd_f
DNA_pol_B_palm
DNA_pol_B_thumb
HHH_8
HHH_5
NTP_transf_2
BRCT_2
Wheel
Motif
Other DBs
NCBI-GeneID:
18260673
NCBI-ProteinID:
XP_006696932
UniProt:
G0SGH5
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MSALDHPNSLARTLNFPIIFLLPTHLSADELEELEEQIPTLTNDINEAEVILGKIFRKER
ALFELRKLKLATEEIQRTGDERPTARSPAHKRAKLTRSVTHSSGIGSDTLDSDTTASVSD
AEIQRRLAGPGPAEQTVRVVRLAWFTESIKAGKVLPTRDYLLYEGRKLRAAPAKQREKTS
PASSEKSVEVMKRARADAEFSPGEGFRPPSSQGRRGETYSSHPVKRPPLVRQTTSEHEID
TQLPPIPDYLHTTYSCQRPTPVNPPNESFIKELEKIKTARTLMGDRIGVRAYSSAIATIA
AYPYAFKTAQEVARLPGCGAKIAQLFQEFKDTGQIAEANEDDSNPRLAVLKLFYEIWGVG
ETTARSFYNRGWRDLDDIVEYGWDSLTRVQQIGVKYYDEFKQGIPREEVERIANTILEHA
NALHPGFEMVIVGGYRRGKLKSGDVDVVLSHRDENATHNFVERIIVRLEEAGYITHTLTL
STANSERGQIPVNWKGDDRRGAGTGFDTLDKALVVWQDPVWTTGEKKNPNPHRRVDIIIS
PWKTVGCAVLGWSSGTTFQRDLRRYCKRERALKFDSSGIRSRVDGSWVDLESGPNGEPAP
DMLTAEKRVFEGLGLVWRPPEERCTG
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccttgatcatcccaactccctcgccaggacgctcaacttccctatcatcttc
ctcctgcccacacaccttagcgccgacgagctagaggaactcgaggagcaaattccaacc
ctaactaatgacataaacgaagctgaagtcattctgggcaagatcttccggaaggagcgt
gctttgttcgagctcagaaagctcaaacttgccacagaagagatacagcggacgggcgat
gagcgcccgacggcaagatccccagctcacaagcgcgccaagctgacgagatcagttacc
cacagctctggcatcggttcagacacactagactcagatacaactgcttcggtatccgat
gccgagattcaacgccgcttagccggtccaggccctgccgagcagacggtcagggtcgta
aggctggcttggttcaccgaatccatcaaagctggaaaggtgcttcctactagagattac
cttctctatgagggtagaaagctacgcgcggctcctgcaaagcaaagagagaaaacctct
cccgcgtcctcggagaagtcagttgaggttatgaagcgcgcccgggccgatgcggaattt
tctccaggagaaggtttccggccaccatcatctcaaggaagaaggggagagacatattct
agtcacccagtcaagcgccctcctttggtcaggcagacgacatcagagcacgagatagac
acccaactacccccgatcccagattatcttcacaccacatactcgtgtcaacggccaaca
ccagtgaatccgccaaacgagtcgtttataaaggagcttgaaaagatcaagacggccagg
accctgatgggtgaccggattggcgtgcgggcgtattcgagcgccattgcaaccatcgcc
gcctacccctatgcgttcaagactgcacaagaggtggcgcgattacccggatgcggggcc
aagatcgcgcagttatttcaagagttcaaggacacgggccagatcgccgaggccaatgag
gacgactcgaaccccagacttgctgtgcttaagctcttttacgagatctggggcgttgga
gagacgacagcccggagtttttacaacaggggttggcgcgacctggacgatatcgtcgag
tatggctgggatagcctgactcgtgtacagcagattggtgtcaagtactacgacgagttc
aagcagggcatcccgcgggaagaggtcgagcgcatagcaaacacaattctagagcatgcc
aacgcgctacacccgggtttcgagatggtcatcgtgggcggctaccgacgtgggaaactg
aagagcggcgacgtggatgtcgtgctcagccaccgtgatgaaaacgctacgcacaatttt
gtcgagcgcatcattgtgcgtctcgaggaagccggatatattacacacactctgactttg
agtacagccaactcggagcgcggccagataccggtcaactggaagggagacgatcgaaga
ggggcaggcaccgggtttgacaccctcgacaaagcgctagtggtatggcaagatccggta
tggacgacaggcgaaaagaagaaccccaacccgcatcggcgggttgacatcatcatcagt
ccgtggaagacggtcggttgtgcggtgctgggttggagcagcggtacgacgttccaacgc
gacctgcggcgctactgtaagcgcgagagggcgcttaagtttgacagcagcggcatccgc
agccgtgtagatgggtcgtgggtagatcttgagagcgggccgaacggcgagccggctccc
gacatgctgacagccgagaaacgggtgtttgaggggctcggcctggtgtggcggccgcca
gaagaacgttgtacaggatag
DBGET
integrated database retrieval system