Cupriavidus taiwanensis: RALTA_A0023
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Entry
RALTA_A0023 CDS
T00702
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase, stimulated by 23S rRNA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
cti
Cupriavidus taiwanensis
Brite
KEGG Orthology (KO) [BR:
cti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cti03009
]
RALTA_A0023 (dbpA)
Enzymes [BR:
cti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
RALTA_A0023 (dbpA)
Ribosome biogenesis [BR:
cti03009
]
Prokaryotic type
rRNA helicases
RALTA_A0023 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
P-loop_SecA
ERCC3_RAD25_C
CMS1
YjeF_N
Motif
Other DBs
NCBI-ProteinID:
CAP62696
UniProt:
B2AFY8
LinkDB
All DBs
Position
1:24344..25753
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AA seq
469 aa
AA seq
DB search
MNSTPAQPPAGPAFSALPLSPAMLATLAQLGYDEMTPIQAASLPITLAGQDLVAQAKTGS
GKTAAFGLALLHRLDPRRFDVQAMVLCPTRELADQVTQEIRRLARAEENVKVLTLCGGSP
MRPQVDSLIHGAHIVVGTPGRILDHIDRGSLDLAAINTLVLDEADRMLDMGFFDDIAYVA
SRCPRDRQTLLFSATYPPGIDKLSHRFLRNPQSLKLEATHDNTTIRQRFYEVEESERLNA
VGRLLDHFRPASTLAFCNTKARCRDLVELLRAQGYQALALHGELEQRERDQVLVQFANRS
CSVLVATDVAARGLDIAQLEAVINVEITPDPEVHVHRIGRTGRADQEGWAFSLVSMDEMG
RVGNLEQHHGGEFEWHPLAELTPASSERLLAPMVTLQMLGGRKEKIRPGDILGALTGEAG
FAKEQIGKINVLEMSTYIAVERSIGREAVKRLNAGKVKGKKVKVRMLTE
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgacccccgcccagccgccagccggccccgctttctccgccctgcccttgtcg
cccgccatgctcgccaccctggcgcagctcggctacgacgaaatgacgccgatccaggcg
gccagcctgccgatcacattggccggccaggacctggtggcgcaggccaagaccggcagc
ggcaagaccgcggcgttcgggctggcgctgctgcaccggctcgatccgcgccgcttcgac
gtacaggccatggtgctgtgtcccacgcgcgagctggccgaccaggtcacgcaggaaatc
cgccgcctggcgcgcgccgaagagaacgtcaaggtgctgacgctgtgcggcggctcgccg
atgcgcccgcaggtcgacagcctgatccatggcgcgcatatcgtggtcggcacgccgggc
cgcatcctcgaccacatcgaccgcggcagcctggacctggcggccatcaacacgctggtg
ctcgacgaggccgaccgcatgctcgacatgggcttcttcgacgatatcgcctatgtggcc
agccgctgccccagggaccggcagacgctgctgttttcggcgacctacccgcccggcatc
gacaagctgagccaccgtttcctgcgcaatccgcagtcgctcaagctggaagccacgcac
gacaacaccaccatccgccagcgcttctacgaggtggaagagagcgagcgcctcaacgcc
gtgggacggctgctggaccacttccgcccggccagcacgctggccttctgcaataccaag
gcgcgctgccgcgacctggtggagttgctgcgcgcgcagggctaccaggcgctggcgctg
catggcgagctggagcagcgcgaacgcgaccaggtgctggtgcagttcgccaaccgcagc
tgctcggtgctggtcgccaccgacgtggccgcgcgcgggctcgatatcgcccagctcgag
gcggtgatcaatgtcgagatcacgccggacccggaggtccacgtgcaccgcatcggccgc
accgggcgtgccgaccaggagggctgggccttcagcctggtcagcatggacgagatgggg
cgcgtgggcaacctggagcagcaccacggtggtgagttcgaatggcacccgctggccgag
ctgacgccggccagttccgaacgcctgctggcgccgatggtgacgctgcagatgctgggc
ggccgcaaggaaaagatccgtcccggcgacatcctcggcgcgctgacgggcgaggccggc
tttgccaaggagcagatcggcaagatcaacgtgctggaaatgtcgacctatatcgccgtc
gagcgcagcatcgggcgcgaggcggtgaagcggctcaatgccggcaaggtcaagggcaag
aaggtgaaggtgcggatgctgacggagtag
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