Chlamydia trachomatis D/SotonD5: SOTOND5_00064
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Entry
SOTOND5_00064 CDS
T02560
Name
(GenBank) RNA polymerase sigma factor sigma-28
KO
K02405
RNA polymerase sigma factor FliA
Organism
ctro
Chlamydia trachomatis D/SotonD5
Pathway
ctro02020
Two-component system
ctro02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ctro00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SOTOND5_00064
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SOTOND5_00064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctro03021
]
SOTOND5_00064
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ctro02035
]
SOTOND5_00064
Transcription machinery [BR:
ctro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SOTOND5_00064
Bacterial motility proteins [BR:
ctro02035
]
Flagellar system
Flagellar assembly proteins
Stator
SOTOND5_00064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
UPF0122
HTH_23
GerE
Sigma70_ECF
HTH_10
Phage_CI_repr
Motif
Other DBs
NCBI-ProteinID:
CCP53136
LinkDB
All DBs
Position
71373..72134
Genome browser
AA seq
253 aa
AA seq
DB search
MKTHDLADTWQLYWSTKEIHHRDVLIESYLPLVKNVAHRLASGMPSHVKMEDLYALGVEG
LIRAVERFDPEKSKRFESYALFIIKAAIIDGLRKQDWVPRSVYQRANRLADAMDSLRQTL
GKEPTDGELCEYLNISQQELSHWFSSSRPALVLSLHDDFSCQDDDEGLALEERIADERAE
TGYDVIRKKEAISILTEALLALDEKERQVMALYYYDDLVLKEIGKILGVSESRVSQIHSK
ALLKLRGTLSSLL
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
gtgaagactcacgatctcgcagatacttggcagctatattggtcgacaaaagaaatccat
catagggatgttttgatcgaatcctaccttcctttagtaaagaatgtagcgcatcggctt
gcttcaggaatgccttctcatgtaaagatggaagatctttatgctctgggggttgaaggg
ttgattcgtgctgtcgaacgttttgatccagaaaaaagcaagcgattcgagagctatgct
ctttttatcataaaagctgcgattattgatggattgcgcaaacaggattgggtaccacgc
agtgtttatcaaagagccaatcgattagctgatgcgatggattctttgagacagacttta
ggtaaagaacctactgatggagaactttgtgagtatctaaatatttcacaacaagagtta
tcccattggttttcctcctctagacctgctctagttctttctttacatgatgatttctcc
tgccaagatgacgatgaggggcttgctttagaagagcgcatagcagatgagcgagcggaa
accggatacgatgtcatcagaaaaaaagaagctatttctattttgacagaagctttgctg
gctcttgatgaaaaagagcggcaggttatggctctttattactatgatgacttggtatta
aaagaaattgggaagattttaggagtgagcgagtcccgagtttctcagatacactccaaa
gctttattgaagttacgaggtacattgtccagtctgctttag
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