Chloroherpeton thalassium: Ctha_1696
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Entry
Ctha_1696 CDS
T00726
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cts
Chloroherpeton thalassium
Pathway
cts03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cts00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Ctha_1696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cts03400
]
Ctha_1696
Enzymes [BR:
cts01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ctha_1696
DNA repair and recombination proteins [BR:
cts03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Ctha_1696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
DEAD
ResIII
Helicase_C
PriA_3primeBD
PriA_CRR
HTH_34
NIR_SIR
AAA_16
zinc-ribbons_6
NOB1_Zn_bind
zf-CHY
HypA
zf-ribbon_3
PyrI_C
DprA_WH
Motif
Other DBs
NCBI-ProteinID:
ACF14153
UniProt:
B3QT54
LinkDB
All DBs
Position
complement(2001310..2003799)
Genome browser
AA seq
829 aa
AA seq
DB search
MKHYHIEHLPEETAWLVYAEEYFRDAPLVCYASPELHEMIQPGSRVLIKIVGRKSKEVLG
FVREVANGVSGAKPAAEIVDVFERGEPLFSPKLFGLIQWLANYYICRPIEALHAALPAEL
RVKPVEKVFLKPFELRSEPETIVKTDLRKRILSYLEKQSPLTVKQLQNRTQSKSLRLALT
QLEAAGYIELKKSYARKGKPKLKTAYTLCKNFSEDEISSLKEDLQRAKKQAEVFERILAF
EQKRFFKEELSASGQILDALCQRGILAKEKVDVSAQYRSVFRETSAKKPLTAAQEPVYEK
IRAALQAAAFRTFLLHGVTGSGKTRIYIEAIRETLGAGKSALVLVPEISLTPQIAARFQA
FFGDNLRVLHSAMNGSEKFEAWESLKTGKARVALGPRSAVFAPLENLGLVIVDEEHESSY
KQFDKPPRYHARDTAIMRAKLEGAVCVLGSATPSFESYYNALSGKYELLTLSERADGAVA
PEIKLVHFPKSAKKSQNLSQPLFEEIEKRHASGEQSILFLNRRGFAGSVRCEKCGFIAMC
SDCHVPLVYHFQKAHLRCHYCGKVADTLHTCPKCGAKDLTLKSSGTERIEIELGQLFPPD
DISRMDLDTTAGKDKHAEILKDFQTGKTKILLGTQMVAKGLDFPNVTLVGVINADIGLTL
PDFRASERLFALLLQVAGRAGRGKKQGEVFMQVFNLESEVFRFVAKGDYEIFYNYEIESR
KELFYPPFSRLAKIEFSGEEENEVASAAADFAKILIRDLDPESFDILGPAPAVMAKLKGR
YRHQILIKQKGTTLISKKLFRKMQFEFRNESKFAAKVRLDIDVDTQSVM
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcattatcacatcgaacatttgccggaggaaaccgcgtggctcgtctacgctgag
gaatattttcgcgatgcgccgctcgtttgctacgcctcgcccgaattgcacgagatgatt
caaccgggttcgcgggttctcattaaaattgtcggtcggaaatcgaaagaggtgttagga
tttgttagggaagtggcaaatggtgtttctggtgcaaagcccgccgctgaaatcgtggat
gtgttcgagcgtggcgagccgttgttttcgccgaagctttttgggcttattcaatggctg
gcgaattattatatctgccgaccgattgaggcgcttcatgctgcgctgcctgcggaactt
cgcgtgaagccggttgaaaaagtgttcctgaaaccattcgaactccgaagcgaaccggag
acgatcgttaagaccgatttacgaaaacgcattctttcttatctcgaaaaacaatctccc
ctaaccgttaagcagcttcaaaatcgcacgcagtcgaaaagcctgcgcttggcgctcacg
cagcttgaagccgcaggctacattgaactgaaaaaatcttacgcccgaaaaggaaaaccc
aaactcaaaaccgcttacacgctgtgcaaaaatttttccgaagatgaaatttcgtcgctg
aaggaggacttgcagagagcgaaaaaacaagcggaggttttcgaacggattctcgcgttt
gagcaaaagcgttttttcaaggaagaactttcggcgtcggggcaaattttggacgcgctt
tgccaacgcggcattttggcgaaggaaaaagtggatgtgtcggcgcaatatcggagcgtg
tttcgcgaaacttctgcgaaaaagccgctcacggcggcgcaagaaccggtttatgaaaaa
atccgtgcggcgctccaagcggcggcgttccgaacttttttgctgcacggcgtgacgggc
agcggcaaaacgcgaatctacatcgaagccattcgcgaaacgctcggcgcgggcaaaagt
gcgctcgttttagtgcccgaaatttccctaacgccgcaaatcgccgcgcgatttcaggca
tttttcggcgacaatctccgcgtgctgcacagcgccatgaatggctcggaaaaatttgag
gcgtgggaaagcttgaaaaccggcaaagcacgggtcgcgctcgggccgcgttcggcggtg
tttgcgccgctggaaaatctcgggctggtgattgtcgacgaggagcatgagtcgtcatat
aagcagttcgacaaaccgccgcgctatcacgcccgcgatacggccatcatgcgagccaag
cttgagggcgcggtttgcgtgcttggctcggccacgccctcgtttgagtcttattacaac
gcgctttcgggcaaatacgaattgctcaccttgagcgagcgagccgacggcgccgttgcg
ccggaaatcaagctcgtgcattttcccaagtccgcgaaaaagtcgcagaatttaagccag
ccgctgtttgaggaaattgaaaaaaggcacgcttcgggcgaacagtcgattctgtttttg
aatcggcgcggctttgcgggcagcgtgcgctgcgagaaatgcggcttcattgcgatgtgt
tcggactgccatgtgccgctagtttatcattttcaaaaagcgcatttgcgctgccattat
tgcggaaaagtcgccgacacgctgcacacttgcccaaagtgcggcgcgaaagatttaacg
ctcaaaagcagcggcacggagagaatcgagatagaacttggccagctatttccgccggac
gacatttcgcgaatggatttggacacgaccgccggcaaggacaaacacgccgaaattctg
aaggattttcaaaccggcaaaaccaagattttgctcggcacgcagatggtcgccaaaggt
ttggactttccaaatgtgacgctcgtcggcgtcatcaatgcggacatcggcctcacgttg
ccggactttcgtgcgtcggaacggctgtttgcgctgctcttgcaagtggccggacgcgcc
ggacgcggcaaaaagcaaggcgaggtgttcatgcaggtgttcaatttagagagcgaagtt
ttccgatttgtcgcgaaaggcgattacgagattttttataactatgaaattgagtcacga
aaagagctgttttatccaccgttttcgcgcttggctaaaattgaattttccggcgaggag
gaaaatgaggtggcatcggcagcagcggattttgccaaaattctgatccgcgatttagac
ccggaatctttcgatattctcggccccgcaccggcggtgatggcaaaactcaaagggcgc
tatcgccaccaaattttgattaagcaaaaaggaacgacgctgatttcgaaaaagctattt
cggaagatgcaattcgagtttagaaacgaaagcaaatttgcggcaaaagtgaggttagat
atcgatgtggacacgcaaagcgtgatgtga
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