Acetivibrio thermocellus DSM 1313: Clo1313_1178 Help Entry Clo1313_1178      CDS       T01933                                  Name (GenBank) DNA ligase, NAD-dependent   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism ctx  Acetivibrio thermocellus DSM 1313 Pathway ctx03030   DNA replication ctx03410   Base excision repair ctx03420   Nucleotide excision repair ctx03430   Mismatch repair Brite KEGG Orthology (KO) [BR:ctx00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     Clo1313_1178    03410 Base excision repair     Clo1313_1178    03420 Nucleotide excision repair     Clo1313_1178    03430 Mismatch repair     Clo1313_1178  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:ctx03032]     Clo1313_1178    03400 DNA repair and recombination proteins [BR:ctx03400]     Clo1313_1178 Enzymes [BR:ctx01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      Clo1313_1178 DNA replication proteins [BR:ctx03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      Clo1313_1178 DNA repair and recombination proteins [BR:ctx03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      Clo1313_1178    NER (nucleotide excision repair)     GGR (global genome repair) factors      Clo1313_1178    MMR (mismatch excision repair)     DNA ligase      Clo1313_1178   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       Clo1313_1178 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD RNA_ligase PTCB-BRCT BRCT_2 RNA_pol_A_CTD HHH RUBY_RBDX PADR1_Zn_ribbon Motif Other DBs NCBI-ProteinID:  ADU74242 LinkDB All DBs Position 1400369..1402360 Genome browser AA seq 663 aa AA seqDB search MDIEKRILELREILNYHSHKYYVEDAPEISDFEYDELYRELEKLEQERPDLITPDSPTQR IGGKPLEGFKKVVHAVQMQSLSDVFSREELLAFDRRVREAVGDDVEYVVEKKIDGLSVSL VYENGVFTRGATRGDGLVGEDVTQNLKTIRTIPLRLKRDLPLLEVRGEVFISKKDFIKIN EEQEAAGQQLFANPRNAAAGSLRQLDPKVTSQRKLDIFVFNIQRIEGQSFKTHSETLEFL KELGFKTSPGYKVCKDINAVWEEINRIGEERGEIDFEIDGAVVKVNSLEQREILGSTIKA PRWAVAYKYPAEVKETVVKKITVNVGRTGVLTPIAIFDPVRLAGSTVSRATLHNMDYIKE KDIRIGDTVRIRKAGDIIPEVVDVVFEKRSGNEAEFNMPEQCPVCGADVVREEGEAAYRC TGIECSAQLYRKIVHFASRDAMNIEGLGPAIIEVLLEKGLIKEIADLYYLHKEKETLVNI ERMGKKSVENLLASIEKSKQNNIDRLIFGFGIRHIGLRAAQLLSENFESLDALMNASAED IMAIPEFGEKMAKSVEQFFRQKQNRDTVEKLKAAGVNTVSFGKKKIKDNRFEGKTFVLTG TLPSFTRKEAEEIIKSFGGKTSGSVSKKTDYVLAGEDAGSKLQKAKELGIEIIDEDKFRK MIE NT seq 1992 nt NT seq  +upstreamnt  +downstreamnt gtggacatagagaaaagaatacttgagcttagagagattttaaactaccacagccataaa tattatgtggaggatgcaccggaaataagcgattttgaatatgatgagctttacagggag cttgaaaaacttgagcaggaaagacctgacctcattacaccggattctcccacccaaaga attggaggaaaacccctggaaggatttaaaaaggttgtgcatgctgtacagatgcaaagt ctttccgatgtgttcagcagggaagagcttttggcatttgacagaagagtgagggaagcc gtgggagacgatgttgagtatgttgtggagaaaaaaattgacggcctgtcggtttcgctg gtttatgaaaacggtgtgtttacaaggggggcaacccgcggcgacggtctggttggagaa gatgtgacacaaaatcttaaaaccataagaacaatacctttgaggctgaaaagggatttg cctttgcttgaggtaagaggcgaagtgtttatatccaaaaaggattttatcaaaataaat gaagagcaggaagcggcaggccagcagctttttgcaaatcccagaaatgccgccgccggc tctttaaggcagctggacccgaaagtgaccagtcaaaggaaacttgacatatttgttttt aatatacaaagaatagagggccaaagttttaaaacccattctgagactcttgagtttctc aaggaacttgggtttaagacaagcccgggatataaggtatgcaaggatataaatgctgtt tgggaggaaataaaccgcatcggagaagaacggggagagattgattttgaaatcgacgga gccgtagtaaaggtgaactccctggaacaaagggaaattttgggttccacaatcaaggct ccgaggtgggctgtagcttataaatatcccgctgaagttaaagaaactgttgttaagaaa ataacggtaaatgtcggaagaacaggggtgttgacgccgattgccatctttgacccggtc agacttgcaggttccaccgtgagcagggccacacttcacaacatggattatataaaagaa aaggatattagaataggtgacacggtgcgtataagaaaggccggtgacataattcccgaa gtagtggatgtggtttttgaaaaacgcagtggaaatgaggctgaattcaacatgcccgaa caatgtcctgtatgtggtgctgatgtagtgagggaagagggggaggcggcatacagatgc accggcattgaatgttccgcccagctgtacagaaaaatagttcattttgcttcaagggat gcaatgaatatagaaggccttggacctgcgattattgaggtcctcctggaaaaagggctc ataaaagagatagctgacctgtattatttgcataaggaaaaagaaacccttgtaaacatc gaaagaatgggtaagaagtccgttgaaaatcttcttgcttcgatagaaaagtcaaagcaa aataatattgacagattgatctttggctttggaatcagacacataggacttcgggcggca cagcttttaagtgaaaattttgagtctcttgacgctcttatgaatgcttccgcggaagat attatggcaataccggaatttggcgaaaaaatggcaaaaagtgttgaacaattcttcagg caaaagcagaacagggatactgtagaaaagcttaaagcagccggagtgaatactgtaagt tttggtaaaaagaaaatcaaagacaacagatttgaaggcaaaacctttgtgttaaccggt acacttccaagctttactcgaaaggaagcggaagaaattataaagagttttggaggaaag acttcaggaagtgtgtctaaaaaaactgattatgtgcttgccggggaagatgcgggaagc aagcttcaaaaagctaaagagctgggaattgaaataattgacgaggataaatttagaaaa atgatagaataa

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