Clostridium tyrobutyricum: CTK_C20700
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Entry
CTK_C20700 CDS
T04331
Symbol
sbcD
Name
(GenBank) DNA repair exonuclease
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ctyk
Clostridium tyrobutyricum
Brite
KEGG Orthology (KO) [BR:
ctyk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctyk03400
]
CTK_C20700 (sbcD)
DNA repair and recombination proteins [BR:
ctyk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CTK_C20700 (sbcD)
Archaeal homologous recombinant proteins
CTK_C20700 (sbcD)
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GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
dCMP_cyt_deam_1
Motif
Other DBs
NCBI-ProteinID:
AND85322
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Position
complement(2052484..2053707)
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AA seq
407 aa
AA seq
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MRILHTSDWHLGKNLEGYSRMDEQEAFLKDFIGIVEENHIDLIIVAGDIYDSYNPPARAE
KMFYDTLKKLSSGGKRMTLIIAGNHDNPDRLVAAGPLAKEHGIIMIGTPKTIVSPGKYGD
HTVVDSGNGYVEIEINGERAVILTLPYPSEKRLNEVLYDEMDTEIKKVQSYNDRIKSIFD
NLSKNYRDDTINLVVSHLFTIGSQEGGSERNVQLGGSFIVDGSCFPEKAQYVALGHIHKP
QIVPGTNGIVRYSGSPLQYNKKEINFKKKCFIVDVKPCEQCSVEEIEFKIYKPIEIWKCK
SVEDAIKKCKINKDRNCFVYIEIMTDTYIGEEAIKLMKTNKKDIIEIVPKIVGENVDNVD
IGSFSEKPFEEIFKEFYFKERKVEPQQEVVDTLLSIMNGGEEENETN
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgagaattttacatacttctgactggcatcttgggaaaaatctggagggatatagcaga
atggatgaacaggaggcttttctcaaagatttcataggtatagttgaagaaaatcacata
gatttgataattgttgcaggagatatttacgacagctataatccacctgcaagagctgaa
aaaatgttttatgatacacttaaaaagctgtcatctggcgggaagagaatgaccctgatc
atagcaggcaaccatgacaatccggatagacttgtagcggcaggccctctcgctaaagaa
catggtattattatgataggtactccaaaaactatagtatctcctgggaaatatggagat
catacagtagttgattctggaaatggatatgttgaaatagaaataaatggagaaagagct
gtaattctcacattgccatacccaagtgaaaagagattaaatgaagtattgtacgatgaa
atggatactgagatcaaaaaggtccaatcatataatgacagaataaaatcaatttttgac
aacctaagtaaaaactatagagatgatactataaacctagttgtttcacatctgtttacg
ataggtagtcaggaaggcggttctgagaggaatgttcagcttggaggaagctttatagta
gatggaagttgtttccctgaaaaagcccaatatgttgcacttggccatattcacaaacct
caaatagtacctggaacaaatggaatagtcagatattcaggatctccacttcagtacaat
aaaaaggaaattaactttaaaaagaaatgttttatagtagatgtaaaaccatgtgaacaa
tgcagcgtggaagagatagaatttaaaatatacaagcctatagaaatatggaaatgcaaa
agtgtagaggatgctataaaaaaatgtaaaatcaataaagacagaaattgttttgtatat
atagaaattatgactgatacatacataggggaagaagcaataaaattaatgaagacaaac
aagaaggatataattgagattgtacctaaaatagtgggagaaaatgtggacaacgtagat
ataggtagtttttctgaaaagccatttgaagaaatatttaaggagttttattttaaggag
aggaaagttgaacctcagcaggaagtggtagatacattattatccattatgaatggaggt
gaagaagaaaatgagaccaattaa
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