Clostridium tyrobutyricum: CTK_C24760
Help
Entry
CTK_C24760 CDS
T04331
Symbol
polA
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ctyk
Clostridium tyrobutyricum
Pathway
ctyk03030
DNA replication
ctyk03410
Base excision repair
ctyk03420
Nucleotide excision repair
ctyk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctyk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CTK_C24760 (polA)
03410 Base excision repair
CTK_C24760 (polA)
03420 Nucleotide excision repair
CTK_C24760 (polA)
03440 Homologous recombination
CTK_C24760 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctyk03032
]
CTK_C24760 (polA)
03400 DNA repair and recombination proteins [BR:
ctyk03400
]
CTK_C24760 (polA)
Enzymes [BR:
ctyk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CTK_C24760 (polA)
DNA replication proteins [BR:
ctyk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CTK_C24760 (polA)
DNA repair and recombination proteins [BR:
ctyk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CTK_C24760 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CTK_C24760 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
Ribosomal_L17
HHH_2
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
AND85722
LinkDB
All DBs
Position
complement(2446063..2448702)
Genome browser
AA seq
879 aa
AA seq
DB search
MTNEKLLILDGHSLMNRAFYALPELTNDEGLHTNAVYGFINMLFKMKEEINPDYIVCTFD
RSVPTFRHKQYDDYKAGRKKMPSELAEQFPILKEILGLLSINTFEIDGFEADDLMGTLSV
FAENKGIQVYIVTGDRDLLQLASDNINIVITKRGITEKEIYDRNRMIEQYGVTPTEFIDV
KGLMGDSSDNIPGVPGIGEKTAFKLIKKYKSLENVLENIENIKGKKLKENLNEYREQAVF
SKKLATIMINVPVEIDLQSIESKDDYDALGLKNIFEKLQFKSLINKIPGLDVIEKAEQKE
LNLNFEIIDSIDKFQNAVDKILEYNGKYILYFNFEICNGGSYSKSYIENIFINIYNDNYV
INMKSTMDEDNEKSLKLLKKIFESMNIKKVGYDIKSQYSILDKLGLDLTNIEFDVKIASY
LLNPSKGKYVLKDMIKEYIGVDLSEEDSEFKIKETFLLSKLHMNLDKKISDLNMKDLLYK
IELPLTRVLSSMECEGFRVDLDKLNELGEKFKIEIEKVKTEIYALSEEEFNINSPKQLGK
ILFEKLDLPVIKKTKTGYSTNAQVLEKLIDKSPIIEKIIYYRQLTKIYSTYIEGLKSVID
DDGKIHSNFNQTVTATGRLSSTEPNLQNIPIKYEMGKEIRKVFIPENDDCIILSADYSQI
ELRVLAHIADDENLINAFKHHSDIHTKTASEVFNIPIDKVTKTQRSNAKAVNFGIIYGIG
DFSLAKDLHISRAEAKNYIETYLERYPNVRKYMEDIVDMAKNQGYVTTIMNRRRAIKEIR
SSNKIVRSLGERLAMNTPIQGSAADIIKIAMINVYNKLREKNLKSKVILQVHDELILNLF
KDELDVVRNIVKTEMENAVSLKVPLEVDINSGDNWYEIK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgactaatgaaaaattattgatattggatggccatagtttgatgaacagagcattttat
gcacttccagaactgactaatgatgaaggccttcatacaaatgcagtttatggatttata
aatatgctttttaaaatgaaagaggaaataaatcctgattatatagtttgtacttttgat
agaagtgtaccaactttcagacataaacaatatgacgattataaagctggaagaaagaaa
atgccttctgaacttgcagaacaatttccaattttaaaggaaattttagggcttctttct
ataaatacatttgagatagacggatttgaagcagatgatctcatgggaactttatctgtg
tttgctgaaaacaagggaatacaagtttatatagtaacaggagatagagatttacttcaa
ctggcttcagataatatcaatatagttataactaaaaggggaattacagaaaaagagata
tatgatagaaataggatgatagagcaatatggggttacacccactgaatttatagatgta
aaaggacttatgggagatagttctgacaatataccaggagttccaggcataggtgaaaaa
acagctttcaagcttataaagaaatataaaagtcttgaaaatgtacttgagaatatagaa
aatataaaaggcaagaagttaaaggaaaatttaaatgaatatagggaacaggcagtattc
agcaaaaaattagccacaattatgataaatgtacctgtggaaatagatttacaatctata
gaatccaaagatgactatgatgctttaggcttgaaaaatatatttgaaaaacttcaattt
aaatccttaataaataagattcccggcttagatgtaattgaaaaagcagaacaaaaagaa
ttgaatttgaattttgagattatagatagtattgacaagtttcaaaatgcagtggataaa
atattagaatacaatggtaaatatatattgtattttaattttgaaatatgcaatggagga
agttattctaagagctatattgaaaatatatttataaacatttataacgataactatgta
ataaatatgaaatctacaatggatgaagataatgaaaaatcattgaaacttttaaagaaa
atatttgaaagtatgaatattaaaaaggtaggatatgatattaaatcgcaatacagtata
cttgataaacttggattggatttgactaatattgaatttgatgtaaaaatagcatcatac
ctcttgaatccttctaaagggaaatatgttttgaaagatatgataaaggaatatattggg
gtagacttgtctgaagaagacagtgaatttaagataaaagaaacatttttattaagtaag
cttcatatgaatttagataaaaaaataagtgatttaaacatgaaggatcttttgtataaa
atagaattgccacttacaagggtattgtcttccatggaatgtgaaggctttagagttgat
ttggataaattaaatgaattaggtgaaaagtttaaaatagaaatagaaaaagttaaaact
gaaatatatgctctttctgaagaagaatttaatataaattcaccaaagcagcttggtaaa
atactttttgaaaaattagatcttccggttataaaaaagactaaaaccggatattcaaca
aatgctcaggtacttgaaaaactcatagataaaagtcctataatagaaaagataatatat
tatagacagcttaccaagatatattctacatatattgaaggactaaagtctgttatagat
gatgacggtaaaattcattctaattttaatcagactgtgactgctacaggaagactctca
agtacagaacccaatcttcaaaatatacctataaaatatgaaatgggtaaggaaataaga
aaggtattcataccggaaaatgatgattgtataatactatctgcagattattcacaaata
gaacttagagttcttgcacatattgcagatgatgaaaatcttataaatgcatttaaacat
catagtgatattcatactaaaacggcatcagaagtatttaatattccaatagacaaggtt
acaaagactcagagaagtaatgctaaggctgtaaattttggaataatatatggtataggt
gattttagccttgcaaaagatttacatatatcaagagctgaagctaaaaattatatagaa
acttatcttgaaagatatccaaatgtaagaaaatatatggaagacattgttgatatggca
aaaaatcagggatatgttactactataatgaatagaagaagggctataaaagaaataaga
tcttcaaacaaaatagtcagatctttgggtgaaagacttgcaatgaatacgcctatacag
ggaagtgcggcagatatcataaagatagccatgataaatgtatataataagttaagggaa
aaaaatctaaagagcaaagttatacttcaagtacatgatgaacttattttaaatttgttc
aaggacgaattggatgtagttagaaatattgtaaaaacagaaatggaaaatgcggtttcc
cttaaagttccactcgaagtagatataaattcaggagataattggtacgaaattaaatag
DBGET
integrated database retrieval system
