Corynebacterium ulcerans 809: CULC809_00366
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Entry
CULC809_00366 CDS
T01880
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cuc
Corynebacterium ulcerans 809
Pathway
cuc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cuc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CULC809_00366 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cuc03021
]
CULC809_00366 (rpoB)
03400 DNA repair and recombination proteins [BR:
cuc03400
]
CULC809_00366 (rpoB)
Enzymes [BR:
cuc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CULC809_00366 (rpoB)
Transcription machinery [BR:
cuc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CULC809_00366 (rpoB)
DNA repair and recombination proteins [BR:
cuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CULC809_00366 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AEG80906
LinkDB
All DBs
Position
405411..408893
Genome browser
AA seq
1160 aa
AA seq
DB search
MAVSRQTKSVADIPGAPERFSFAKITEPIEVPGLLDIQLDSFAWLIGTPEWRARQQEELG
ENVRVTSGLEDILEELSPIQDYSGNMSLSLSEPRFEDMKNTIDECKDKDINYSAPLYVTA
EFINNETQEIKSQTVFIGDFPMMTNKGTFIVNGTERVVVSQLVRSPGVYFDQTIDKSTER
PLHSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTTEQITERFGFSEI
MMSTLESDGVANTDEALLEIYRKQRPGEQPTRDLAQSLLDNAFFRAKRYDLAKVGRYKVN
RKLGLGGDNEGLMTLTEQDIATTLEYLVRLHAGESTMVAPNGDVIPVDTDDIDHFGNRRL
RTVGELIQNQVRVGLSRMERVVRERMTTQDAESITPTSLINVRPVSAAIREFFGTSQLSQ
FMDQNNSLSGLTHKRRLSALGPGGLSRERAGIEVRDVHASHYGRMCPIETPEGPNIGLIG
SLASYARVNSFGFIETPYRKVENGVLTDQIDYLTADEEDRFVVGQAHVEVDANGKITADS
VTVRVKNGDIQVVAPESVDYLDVSPRQMVSVATAMIPFLEHDDANRALMGANMQRQAVPL
VRSEAPFVGTGMERRAAYDAGDLIINKKAGAVENVSADFITVMADDGTRETYMLRKFERT
NQGTCYNQIPLVNLGDRVEAGQVLADGPGTHNGEMSLGRNLLVAFMPWEGHNYEDAIILN
QRVVEEDILTSIHIEEHEIDARDTKLGAEEITREIPNVSEDVLKDLDERGIVRIGADVRD
GDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSMKVPHGETGKVIGVRRFSREDD
DDLAPGVNEMIRVYVAQKRKIQDGDKLAGRHGNKGVVGKILPQEDMPFMPDGTPVDIILN
THGVPRRMNIGQVLEVHLGWLAAAGWKIDPEDPANAELLKTLPEELYDVPAGSLTATPVF
DGATNEEVAGLLANSRPNRDGDVMVDENGKAQLFDGRSGEPFPYPVSVGYMYMLKLHHLV
DEKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWAMQAYGAAYTLQELLTIKSDDVV
GRVKVYEAIVKGENIPDPGIPESFKVLLKELQSLCLNVEVLSADGTPMELSGSDDDEFDQ
AGASLGINLSRDERSDADIA
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
ttggcagtctcccgccagaccaagtcagtggccgacatccccggggctcccgaacgtttt
tcgttcgccaaaattacggaacctattgaggtcccgggacttctcgatattcagctagat
tctttcgcatggctcattggcacgcctgagtggcgtgcccgccagcaggaggagctgggt
gaaaacgtccgcgtaaccagcggactggaagacatcctggaggagctctctccgattcag
gattattccggaaatatgtcattgtctctctcggagccacgcttcgaggacatgaagaac
actatcgatgagtgtaaagacaaggacattaactattctgcgccgctttatgtgactgca
gaattcatcaacaacgaaactcaggagatcaagtcccagactgtcttcatcggtgacttc
ccgatgatgaccaacaagggaacattcattgtcaacggcaccgagcgtgtcgtggtctcc
cagcttgttcgttcgcctggtgtttactttgaccagacgattgataagtccaccgagcgt
ccactgcactctgtgaaggtgatcccttctcgcggtgcatggttggaattcgacgtggac
aagcgcgacaccgttggtgtgcgtattgaccgcaagcgtcgccagccggtgacggttctg
ctcaaggctcttggttggaccaccgagcagatcacggagcgctttggcttctccgaaatt
atgatgtccacgctcgagtcagacggtgtagcgaacactgatgaggctctgctggagatc
taccgcaaacagcgtccgggcgagcagccgactcgtgacctcgcacagtcactgctagac
aacgccttcttccgcgcgaagcgttacgaccttgccaaggttggacgctacaaagtgaac
cgcaaactcggtcttggtggagacaacgagggcttgatgaccctcaccgagcaggacatc
gccaccaccctcgagtacctcgtacgcctccatgcaggcgagagcaccatggttgcacca
aacggcgatgtgattcctgtggacacagatgacatcgaccactttggtaaccgtcgtctg
cgtaccgtcggagagctgatccagaaccaggtccgcgtgggtctgtcccgcatggagcgc
gtggttcgcgagcgcatgacaacccaggatgcggagtccattactcctacctccctgatc
aacgtgcgcccggtttctgctgccatccgcgagttctttggtacctcccagctctcgcag
ttcatggaccagaacaactccctgtctggccttactcacaagcgtcgtctctctgccctg
ggcccaggcggcctttcgcgtgagcgcgctggcatcgaggttcgagacgttcacgcttct
cactacggccgtatgtgcccgattgagactcccgaaggtccgaacattggtttgattggt
tccttggcttcctatgcacgagtgaactctttcggattcattgagactccttaccgcaag
gtagaaaacggtgttctcaccgatcagatcgactacctcacagcagatgaggaagaccgc
tttgtggtgggccaggctcacgttgaggtggacgcgaacggcaagatcactgcggacagc
gttaccgtgcgtgtgaagaatggtgacattcaggtcgttgcgccggaaagcgttgattac
ctcgacgtttccccacgtcagatggtttctgtggctaccgccatgattccgttccttgag
cacgacgacgctaaccgtgccctcatgggcgcgaacatgcagcgtcaggctgtgccgctg
gttcgttcggaagctccgttcgttggtaccggcatggagcgtcgtgctgcttatgacgcc
ggcgacctcatcatcaacaagaaggctggcgctgtagaaaacgtctccgctgacttcatc
accgtgatggctgatgacggcacccgcgagacctacatgctgcgcaagttcgagcgcacc
aaccagggtacctgctacaaccagatcccattggtgaacttgggcgaccgcgttgaggct
ggacaggttcttgcagatggccccggtactcacaatggcgagatgtcgcttggacgtaac
ctcctcgttgcgttcatgccttgggaaggccacaactacgaggacgctattatcctcaac
cagcgtgttgtggaagaggacatccttacttcgatccacatcgaggagcacgagattgat
gcccgcgacaccaagcttggtgccgaggagattactcgtgagatcccgaatgtgtccgag
gatgtgctcaaggacctcgacgagcgcggtatcgtccgcatcggcgcagatgtccgcgat
ggcgatatcttggtgggtaaggtcacgcctaagggcgagaccgagctgacccctgaagag
cgcctgttgcgtgcaatcttcggtgagaaggcacgcgaggttcgcgatacctctatgaag
gttcctcacggcgagaccggtaaggtcatcggcgttcgtcgtttctcccgtgaagacgat
gacgatctcgcacctggcgttaacgagatgattcgcgtttacgttgcccagaagcgcaag
atccaggacggcgataagctcgctggtcgccacggtaacaagggtgttgttggcaagatt
cttccgcaggaagatatgccgttcatgcctgacggtaccccggtcgacatcatcctgaac
acgcacggtgtgcctcgtcgtatgaacatcggccaggttctggaagtccaccttggttgg
ttggctgctgccggttggaagatcgatcctgaagatcctgctaacgctgagctgctgaag
actctgcctgaggagctatacgacgtccctgctggttcgctcaccgcaaccccagtgttc
gacggcgctaccaacgaggaagttgctggtcttcttgccaactcccgtccaaaccgcgac
ggcgacgtcatggtggacgaaaacggcaaggcacagcttttcgacggccgttctggcgag
cctttcccatacccagtgtctgtcggctacatgtacatgctgaagctgcaccacttggtt
gatgagaagatccacgcacgttccaccggcccttactccatgattactcagcagccgctg
ggcggtaaggcgcagttcggtggacagcgcttcggcgaaatggaggtgtgggcaatgcag
gcttatggcgctgcctacacgcttcaggagcttctgaccatcaagtctgacgacgtggtc
ggccgtgtgaaggtctacgaggcaatcgttaagggcgagaacattccggatccgggtatc
cctgagtccttcaaggtgctcctcaaggaacttcagtcgctgtgcttgaacgtggaagtt
ctttctgcagacggcactccgatggagctgtccggttcggatgacgacgagttcgaccag
gctggtgcttcactaggcatcaacctgtctcgcgacgagcgttccgacgccgacatcgcc
taa
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